PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY84854.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 300aa MW: 33011 Da PI: 5.6456

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY84854.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	24	8e-08	5	37	4	36
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg 36 + C+ +++ + fC+ ++ +lC+ C +H TEY84854.1 5 KLCDSCKSASAAVFCRADSAFLCRACDADIHAA 37 68***************************9954 PP
2	zf-B_box	29.2	1.9e-09	47	92	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +e+ ++++ C+ + lC+ C +H+ H++ p+ TEY84854.1 47 VWICEVCEQAPASFTCKADAAALCAACDADIHSAnplarrHDRLPI 92 689*****************************66888888988775 PP
3	CCT	70.9	3.1e-24	242	284	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 Rea+++RY+eKrk+R+FeK+irY+sRKa+Ae+RpR+KGrF+k TEY84854.1 242 REARVMRYREKRKNRRFEKTIRYASRKAYAETRPRIKGRFAKL 284 9****************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MITAKLCDSC KSASAAVFCR ADSAFLCRAC DADIHAANQL ASRHGRVWIC EVCEQAPASF 60 TCKADAAALC AACDADIHSA NPLARRHDRL PISPFYDSTS ASSEEEAEAA SWLLPDPNSK 120 IEEESGSLEY MSLFSDMDPY LDLDLKCKPH QIVDSEHKHY SAADGVVPVQ SKAEYRSGHY 180 VPGPVVDGFP TYEMDYPSPK PFMYNFTSQS ISQSVSSSSM EVGVVPEADA SESATAAVGM 240 DREARVMRYR EKRKNRRFEK TIRYASRKAY AETRPRIKGR FAKLSELEVE SAAYGVVPSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57660.1	1e-70	CO-like family protein