PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY84723.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 622aa MW: 68002.5 Da PI: 6.5655

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY84723.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.5	1.2e-23	121	222	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ +++ + t+ +d +g +W++++iyr++++r++lt+GW++Fv++++L +gD++vF +++++ l TEY84723.1 121 FAKTLTQSDANNGGGFSVPRYCAETIfprldysAEPPVQ--TILAKDVHGVVWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFL--RTENGDL 215 89**************************986445444..8999*****************************************..4588999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ TEY84723.1 216 CVGIRRA 222 **997 PP
2	Auxin_resp	113.3	2.2e-37	283	366	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++FevvY+Pra+++eFvv+ + v++al+v+++ GmRfkmafetedss++++ +Gt+++v+ dp++WpnS+Wr+L+ TEY84723.1 283 AASVAANGQPFEVVYYPRAGSPEFVVRESAVRAALRVQWCSGMRFKMAFETEDSSRISWfMGTISSVQVDDPIHWPNSPWRLLQ 366 68899*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 622 aa Download sequence
MINVMHSLSK PMNQMENCLD PQLWHACAGG MAQIPPPNSK VYYFPQGHAE HANENVDFMK 60 FPRISPLVLC RVASIKYLAD SESDEVFAKI RLVPLVGSES DVCEDERGFE RSEEAEKANS 120 FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSAEPPVQT ILAKDVHGVV WKFRHIYRGT 180 PRRHLLTTGW SNFVNQKKLV AGDSIVFLRT ENGDLCVGIR RAKRGIGGSA EVSCGWNTGI 240 PALQGGFSGF LGESVGLGGR RGGGAELGLK ERDNVKAEAV VEAASVAANG QPFEVVYYPR 300 AGSPEFVVRE SAVRAALRVQ WCSGMRFKMA FETEDSSRIS WFMGTISSVQ VDDPIHWPNS 360 PWRLLQVVWD EPDLLHNVKR VNPWLVELVS AMAAGHGHGF SPFSPPRKRP RLPQPTEFPY 420 GQFPTGTLVT NPLSPSSPLC CLPDHIPAGV QGARHARFEP PPSDLQYTKL QPFDFKLLDY 480 AGQFPGVLSS YPTSSSSMKT GSSTKKSNEA KEPMFLLFGQ PILTAEQISQ SHSEGNNSSD 540 GNQDNTANVS NGSGSAVIQN FPPEASSDGE FGMERSEMSS NVLYNDARGN AKHIGDEPFG 600 DFIKNARRLT IVMDSGSVNL GN

Sequence ? help Back to Top

Protein Sequence Length: 622 aa Download sequence

MINVMHSLSK PMNQMENCLD PQLWHACAGG MAQIPPPNSK VYYFPQGHAE HANENVDFMK  60
FPRISPLVLC RVASIKYLAD SESDEVFAKI RLVPLVGSES DVCEDERGFE RSEEAEKANS  120
FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSAEPPVQT ILAKDVHGVV WKFRHIYRGT  180
PRRHLLTTGW SNFVNQKKLV AGDSIVFLRT ENGDLCVGIR RAKRGIGGSA EVSCGWNTGI  240
PALQGGFSGF LGESVGLGGR RGGGAELGLK ERDNVKAEAV VEAASVAANG QPFEVVYYPR  300
AGSPEFVVRE SAVRAALRVQ WCSGMRFKMA FETEDSSRIS WFMGTISSVQ VDDPIHWPNS  360
PWRLLQVVWD EPDLLHNVKR VNPWLVELVS AMAAGHGHGF SPFSPPRKRP RLPQPTEFPY  420
GQFPTGTLVT NPLSPSSPLC CLPDHIPAGV QGARHARFEP PPSDLQYTKL QPFDFKLLDY  480
AGQFPGVLSS YPTSSSSMKT GSSTKKSNEA KEPMFLLFGQ PILTAEQISQ SHSEGNNSSD  540
GNQDNTANVS NGSGSAVIQN FPPEASSDGE FGMERSEMSS NVLYNDARGN AKHIGDEPFG  600
DFIKNARRLT IVMDSGSVNL GN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	258	264	GGRRGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein