PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY83221.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

bHLH

Protein Properties

Length: 393aa MW: 41963.5 Da PI: 7.3941

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY83221.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.9	5.5e-16	236	281	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ ErrRRd+iN+++ +L++l+P++ K +Ka++L ++++Y+k+Lq TEY83221.1 236 HNQSERRRRDKINERMKTLQKLVPNS-----SKTDKASMLDEVIDYMKQLQ 281 9**********************8.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MNHSSCSKSS NSFATDAPSL DYEVAELAWE NGQLAMYGLG APRPLNNKAA GADTLESIVD 60 QATFSLPHAK SAALVPWLDH GAVSASASAA AAASMDALVP CNNSRNEKHE NSTQVPGIGG 120 ACTVGSCSGA EGLARAAGRG FCTSYTSDTC GGGRDSLLDS CDREFAGRGI TSTSLWSPEN 180 TSSGEDCTKT SAEDHETVCY GGSQACSAQA GKKSNRKLGI GKSSIISSKV RAAAIHNQSE 240 RRRRDKINER MKTLQKLVPN SSKTDKASML DEVIDYMKQL QAQVQMMSRM SMPSMNMMMP 300 LSMQQHLQMS MMTPTMALPM PMGVMDIGRA TGMLPMMPSS AGFMPWDIQP PPPTPDFLSN 360 FFATQSQQPM TVDGYTRLAA MYQQLQQTSA SKK

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MNHSSCSKSS NSFATDAPSL DYEVAELAWE NGQLAMYGLG APRPLNNKAA GADTLESIVD  60
QATFSLPHAK SAALVPWLDH GAVSASASAA AAASMDALVP CNNSRNEKHE NSTQVPGIGG  120
ACTVGSCSGA EGLARAAGRG FCTSYTSDTC GGGRDSLLDS CDREFAGRGI TSTSLWSPEN  180
TSSGEDCTKT SAEDHETVCY GGSQACSAQA GKKSNRKLGI GKSSIISSKV RAAAIHNQSE  240
RRRRDKINER MKTLQKLVPN SSKTDKASML DEVIDYMKQL QAQVQMMSRM SMPSMNMMMP  300
LSMQQHLQMS MMTPTMALPM PMGVMDIGRA TGMLPMMPSS AGFMPWDIQP PPPTPDFLSN  360
FFATQSQQPM TVDGYTRLAA MYQQLQQTSA SKK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	240	245	ERRRRD
2	241	246	RRRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	1e-58	bHLH family protein