PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY82066.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HB-PHD

Protein Properties

Length: 804aa MW: 89643 Da PI: 4.6335

Description

HB-PHD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY82066.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	41.1	2.9e-13	694	736	10	52
HHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 10 eqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 +++L + F++n+yp+++++e LAk+lgL+ rqV WF N R TEY82066.1 694 AATQRLLASFNENQYPDRATKENLAKELGLEVRQVGKWFENAR 736 56899************************************99 PP
2	PHD	38.7	2.3e-13	346	401	1	51
SBTTTSS..TCTTSSEEEBSS.SSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS PHD 1 rCkvCgk..sdeegelvlCdg.CkewfHlkClglkleseekpeg..ewlCeeCkek 51 +C+ Cg+ + e++++lCdg C++ fH+ Cl+++l ++++p g +wlC+ C++k TEY82066.1 346 FCAKCGSkdLTLENDIILCDGaCERGFHQFCLEPPLLKTDIPPGdeSWLCPGCDCK 401 699*965555****66****************9999*****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 804 aa Download sequence
MGLIDNGAAQ LESNMCEQSN SPKDKKSDPP YDSRMDQERC VSEPMEQKET NESQHIEKIL 60 VSAQEKSHET REIGLANGEI PHNEYTNDQE PTLENMRIHL DSKYLEVASQ NVLSCLEDIG 120 IPPGTTSINP GCGAQVLLNI EATNDSVLLE NGDRGSLQEH PGCGKLVPLK VEVTNVNDSV 180 ILENDGTGSS TQQIKRKAKL EGPSSTSWLL RSRSQEKLKA PEPVAVETVN EGSANVEKKK 240 RGRKPKNMQK TTVSEFSRKK NHLRYLLHRI NYEKNLIDAY SAEGWRGQSL DKLKPEKELE 300 KAKSRILNYK LKIRALFQSL DQSLTMGKLP ESLFDAQGEI DSEDIFCAKC GSKDLTLEND 360 IILCDGACER GFHQFCLEPP LLKTDIPPGD ESWLCPGCDC KADCIDVLKD FHETKISIID 420 SWEKIFPEAA ASGEKMDDGF GSSSDDSEDE EYDPDKPDSS EQVEGNKSSP DESSYFSASD 480 DLGASDNNEK YLGLPSDDSE DDDFNPSAPN QDNQVKQDSS SSDFSSDSED LRALIEDDET 540 ATSEDHRKTS ESAHHKQKSQ GFGEEISYVG RKKRQSLKDE LSYLTEASAE PLSRKRHVER 600 LDYKKLNDET YGNSSSDSSD EDFDDATITR KRTKTDHDEV KFSVETVVTA SNTNKEDENQ 660 TVKKRNSKGT RRNNSDGCAS ASAKKPTPKR LGEAATQRLL ASFNENQYPD RATKENLAKE 720 LGLEVRQVGK WFENARWSFN HRPRVESDSA ERPPTGTDGT HSHQNTESSE ISAQNHIAKL 780 REENLVNDTS GDSSGKQATE KEER

Sequence ? help Back to Top

Protein Sequence Length: 804 aa Download sequence

MGLIDNGAAQ LESNMCEQSN SPKDKKSDPP YDSRMDQERC VSEPMEQKET NESQHIEKIL  60
VSAQEKSHET REIGLANGEI PHNEYTNDQE PTLENMRIHL DSKYLEVASQ NVLSCLEDIG  120
IPPGTTSINP GCGAQVLLNI EATNDSVLLE NGDRGSLQEH PGCGKLVPLK VEVTNVNDSV  180
ILENDGTGSS TQQIKRKAKL EGPSSTSWLL RSRSQEKLKA PEPVAVETVN EGSANVEKKK  240
RGRKPKNMQK TTVSEFSRKK NHLRYLLHRI NYEKNLIDAY SAEGWRGQSL DKLKPEKELE  300
KAKSRILNYK LKIRALFQSL DQSLTMGKLP ESLFDAQGEI DSEDIFCAKC GSKDLTLEND  360
IILCDGACER GFHQFCLEPP LLKTDIPPGD ESWLCPGCDC KADCIDVLKD FHETKISIID  420
SWEKIFPEAA ASGEKMDDGF GSSSDDSEDE EYDPDKPDSS EQVEGNKSSP DESSYFSASD  480
DLGASDNNEK YLGLPSDDSE DDDFNPSAPN QDNQVKQDSS SSDFSSDSED LRALIEDDET  540
ATSEDHRKTS ESAHHKQKSQ GFGEEISYVG RKKRQSLKDE LSYLTEASAE PLSRKRHVER  600
LDYKKLNDET YGNSSSDSSD EDFDDATITR KRTKTDHDEV KFSVETVVTA SNTNKEDENQ  660
TVKKRNSKGT RRNNSDGCAS ASAKKPTPKR LGEAATQRLL ASFNENQYPD RATKENLAKE  720
LGLEVRQVGK WFENARWSFN HRPRVESDSA ERPPTGTDGT HSHQNTESSE ISAQNHIAKL  780
REENLVNDTS GDSSGKQATE KEER

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	237	245	EKKKRGRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19510.1	8e-76	HB-PHD family protein