PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY82018.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 245aa MW: 28048.9 Da PI: 9.2778

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY82018.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	85.2	3.9e-27	29	78	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRr g+lKKA+ELS+LCdaev +i+fsst kly+++s TEY82018.1 29 RIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGLIVFSSTEKLYDFAS 78 8***********************************************86 PP
2	K-box	81.7	1.7e-27	100	189	9	98
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + +++ + +q+e++ L ++++ Lq+ +R+llGe+L+ Ls+++Lq+Le+qLekslk +R kK++ l e+i+el +k + +q+en +L+kk+ TEY82018.1 100 NPTSEIKFWQREATSLGQQLHYLQQCHRQLLGEELSGLSINDLQNLENQLEKSLKGVRIKKEQTLSEEIKELNMKGNLIQQENIELHKKI 189 5678899*********************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MSDFVVESRR RNPRISEEEM GRGKIAIRRI DNSTSRQVTF SKRRSGLLKK AKELSILCDA 60 EVGLIVFSST EKLYDFASTS MKSVIERYTK LNEENYPLSN PTSEIKFWQR EATSLGQQLH 120 YLQQCHRQLL GEELSGLSIN DLQNLENQLE KSLKGVRIKK EQTLSEEIKE LNMKGNLIQQ 180 ENIELHKKIH VVSQENAELQ KKVYGPERIS AVNGALKEYD AKAAINLELS QSQSENRKKP 240 DVNLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	3e-90	MIKC_MADS family protein