PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY81299.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARR-B

Protein Properties

Length: 609aa MW: 67863.7 Da PI: 7.1076

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY81299.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	85.3	6.4e-27	172	224	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 r++Wt eLH+ Fv av+qL G++kA+Pk+il+lm+v++L++e+v+SHLQkYRl TEY81299.1 172 LRVVWTVELHRLFVTAVNQL-GIDKAVPKKILQLMNVPCLSRENVASHLQKYRL 224 69****************.******************************8 PP
2	Myb_DNA-binding	35.5	2.4e-11	173	223	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT e++ l+v av+qlG + +k+I + m+ ++++++ s++qky+ TEY81299.1 173 RVVWTVELHRLFVTAVNQLGIDkaVPKKILQLMNvPCLSRENVASHLQKYR 223 678******************************999**********7 PP
3	Response_reg	43.6	1.5e-15	14	98	25	109
EEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHH.HHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 25 evaeaddgeealellkekd..pDlillDiempgmdGlellkei.reeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 +v+ ++ +e al+l++++ +D+++ D+ mp+mdG++ll++i e + i+++a ++++ + + + Ga d+l Kp+ +e+l + TEY81299.1 14 SVTKCSRAEVALQLVRDNMdgFDIVMSDVHMPDMDGFKLLEHIgLEMD---LLIMMSADDSKSVVMKGITHGACDYLIKPVRMEALKN 98 678899999****776669******************66666...78999*************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 609 aa Download sequence
MKPTIIRNLV FEVSVTKCSR AEVALQLVRD NMDGFDIVMS DVHMPDMDGF KLLEHIGLEM 60 DLLIMMSADD SKSVVMKGIT HGACDYLIKP VRMEALKNIW QHVIRKKKYE CKEKDTEHLG 120 SVEEGDDQQH KPTDNADYSS SANEGNWRSL RKREEDEDDG DDKDESSALK KLRVVWTVEL 180 HRLFVTAVNQ LGIDKAVPKK ILQLMNVPCL SRENVASHLQ KYRLYLRRIG QQSQNGAGSS 240 FLEHQDAGFG MISSVNGLDP QALASSAHSL GRVTNNSVPI VDQLNIFSIN NPNIRFLDGQ 300 QHYNHSMQVN PLHGIPTNMD PQQLVALQPF GKMHMNIHSQ SGPVIRQLVQ PQSRTQMLNQ 360 VGGNQLLTHR SSVGPPGLSQ AVPGSVFCMY GMDNVRAPTY TPLPQNVGSS QHQGRVDVAP 420 SVLFQPGFAS EHRNGHMRNG ANLRPSQGES SHSLPTPHIP ESSKTVDTST NDGGASRKRT 480 IEHSTEKPPP APKKKKRSPY WDHCEKRVEK LSDGSLQVTG ICKYCQVEIP CGGGSTSGLI 540 NHLVKRCTLC PLYDHSCHEK GHCKGYLCND KFSLYKDPTD DDLDLYKEIE EIEKNAHMSQ 600 DDSQVLSTT

Sequence ? help Back to Top

Protein Sequence Length: 609 aa Download sequence

MKPTIIRNLV FEVSVTKCSR AEVALQLVRD NMDGFDIVMS DVHMPDMDGF KLLEHIGLEM  60
DLLIMMSADD SKSVVMKGIT HGACDYLIKP VRMEALKNIW QHVIRKKKYE CKEKDTEHLG  120
SVEEGDDQQH KPTDNADYSS SANEGNWRSL RKREEDEDDG DDKDESSALK KLRVVWTVEL  180
HRLFVTAVNQ LGIDKAVPKK ILQLMNVPCL SRENVASHLQ KYRLYLRRIG QQSQNGAGSS  240
FLEHQDAGFG MISSVNGLDP QALASSAHSL GRVTNNSVPI VDQLNIFSIN NPNIRFLDGQ  300
QHYNHSMQVN PLHGIPTNMD PQQLVALQPF GKMHMNIHSQ SGPVIRQLVQ PQSRTQMLNQ  360
VGGNQLLTHR SSVGPPGLSQ AVPGSVFCMY GMDNVRAPTY TPLPQNVGSS QHQGRVDVAP  420
SVLFQPGFAS EHRNGHMRNG ANLRPSQGES SHSLPTPHIP ESSKTVDTST NDGGASRKRT  480
IEHSTEKPPP APKKKKRSPY WDHCEKRVEK LSDGSLQVTG ICKYCQVEIP CGGGSTSGLI  540
NHLVKRCTLC PLYDHSCHEK GHCKGYLCND KFSLYKDPTD DDLDLYKEIE EIEKNAHMSQ  600
DDSQVLSTT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	477	497	RKRTIEHSTEKPPPAPKKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-109	ARR-B family protein