PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY80778.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | FAR1 | ||||||||
Protein Properties | Length: 240aa MW: 26945.4 Da PI: 8.6903 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 60.7 | 4.4e-19 | 74 | 159 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +YneYA ++GF +r+ +s ks+ +g++++r f C + +++++ + +++ +++r gC+a+l vk+e+ g+w+v+k++ +HnH+l+ TEY80778.1 74 YYNEYAGRAGFLTRIISSCKSEGDGSFVSRGFGCRNIPTSQKTGNM---SNEGGQKQRGGCTATLLVKRENGGRWVVKKFVRDHNHPLV 159 8*********************************998888887766...78888999******************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MCNIYSSYGM LVEFHGWTYA VQYFLSVDAD AALDGGNGLM EASVPGDVTT PEAERNAEPY 60 VGMVFETEAA ARAYYNEYAG RAGFLTRIIS SCKSEGDGSF VSRGFGCRNI PTSQKTGNMS 120 NEGGQKQRGG CTATLLVKRE NGGRWVVKKF VRDHNHPLVV SLPRRCPTFD EKDKRIQELT 180 AEIRVKKRLS AAYREQLLIL MKDVESHTDH ITSKVQMTRN NLKELEERRQ QLSNHNKPSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 6e-40 | FAR1 family protein |