PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY80224.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 440aa MW: 47787.9 Da PI: 9.4673

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY80224.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.5	2.6e-06	52	74	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C C+k F+r nL+ H r H TEY80224.1 52 FVCDVCNKGFKRDQNLQLHRRGH 74 89*******************88 PP
2	zf-C2H2	12.2	0.00057	128	150	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H + + TEY80224.1 128 WKCEKCSKKYAVQSDWKAHSKIC 150 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MSNLTCEASL FSNSSNLTQL PTKKRRNQPG HPEPGAEVIA LSPRSLMATN RFVCDVCNKG 60 FKRDQNLQLH RRGHNLPWKL KQKSKKEAGR KVYICPEIGC VHHDPSRALG DLTGIKKHFF 120 RKHGEKKWKC EKCSKKYAVQ SDWKAHSKIC GTREYRCECG TLFSRRDSFV THRAFCDALS 180 QEAQMGAKSI NINKEEIPAW LSSINPSNSI WPGAYHHHQP THFSATALLQ KAAQMGAKSS 240 SQQFPSPFTT PHQAGHVTPI QTEGFGTSRD QLVHSLASYE DKAASTTPLA HHDQMMMMTM 300 NKNNAGFHQG RDDHVFAGGF NGTRDFLGLR PLSQNDILSL TGANVGGGGG GGPIEIRNGD 360 SSGSSSGGEV VVELVEKMAA ERGPALTIRH HMAAAEERGP APAVEGRGPS LAAEERGPAP 420 AVEGRGPSLA AEERGPAPVV

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MSNLTCEASL FSNSSNLTQL PTKKRRNQPG HPEPGAEVIA LSPRSLMATN RFVCDVCNKG  60
FKRDQNLQLH RRGHNLPWKL KQKSKKEAGR KVYICPEIGC VHHDPSRALG DLTGIKKHFF  120
RKHGEKKWKC EKCSKKYAVQ SDWKAHSKIC GTREYRCECG TLFSRRDSFV THRAFCDALS  180
QEAQMGAKSI NINKEEIPAW LSSINPSNSI WPGAYHHHQP THFSATALLQ KAAQMGAKSS  240
SQQFPSPFTT PHQAGHVTPI QTEGFGTSRD QLVHSLASYE DKAASTTPLA HHDQMMMMTM  300
NKNNAGFHQG RDDHVFAGGF NGTRDFLGLR PLSQNDILSL TGANVGGGGG GGPIEIRNGD  360
SSGSSSGGEV VVELVEKMAA ERGPALTIRH HMAAAEERGP APAVEGRGPS LAAEERGPAP  420
AVEGRGPSLA AEERGPAPVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55110.1	3e-94	C2H2 family protein