PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY80046.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 301aa MW: 34724.2 Da PI: 7.8163 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 73.1 | 3.6e-23 | 122 | 182 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59 ++D y+WrKYGqK++ +s++prsY+rCt++ gC++ k+v+r + ++ + ++tY +H+++ TEY80046.1 122 MEDNYAWRKYGQKTILNSDYPRSYFRCTHKqdGCKALKQVQRIKGEEIMYQTTYLIHHTCK 182 58***************************9999*************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 301 aa Download sequence |
MGSLNMDNFH ARKRKAMVKL VKGKQIAVHL QSLLHEPVRN SEPVLEQQLA FQIYRSFSET 60 LSDLSSCTTQ IPAVEGGASA SSSSSGDTRR KKKMKKRGVK DLRGCYKRRR TSDSWVTLSP 120 TMEDNYAWRK YGQKTILNSD YPRSYFRCTH KQDGCKALKQ VQRIKGEEIM YQTTYLIHHT 180 CKETLRARPL VVEYSDLIDP NLISFQTSMT SEQDHQHCNH SSKIPLIISS VKREECVSED 240 ASHEAKSTLE DPWNDIIGLD TFPVWTPYQD EVESASLDGL HMEVNQLCDI QYFHYFDDHM 300 Y |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 89 | 109 | RRKKKMKKRGVKDLRGCYKRR |
2 | 89 | 110 | RRKKKMKKRGVKDLRGCYKRRR |
3 | 90 | 110 | RRKKKMKKRGVKDLRGCYKRR |
4 | 90 | 111 | RRKKKMKKRGVKDLRGCYKRRR |
5 | 91 | 111 | RRKKKMKKRGVKDLRGCYKRR |
6 | 91 | 112 | RRKKKMKKRGVKDLRGCYKRRR |
7 | 95 | 116 | RRKKKMKKRGVKDLRGCYKRRR |
8 | 107 | 134 | KRRRTSDSWVTLSPTMEDNYAWRKYGQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G56400.1 | 7e-37 | WRKY family protein |