PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY80004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | LBD | ||||||||
Protein Properties | Length: 159aa MW: 17715.2 Da PI: 6.6094 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 119.3 | 2.2e-37 | 7 | 107 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+lrr+C++dC++ pyf eq +++f +vh++FGasnv+k+l +lp + r da++ ++yeA ar++dPvyG++++i++lqqq++ lk+e+++++ TEY80004.1 7 SCGACKFLRRRCTPDCTFTPYFSYEQaASHFSAVHRVFGASNVSKMLLRLPLHSRGDAAAMICYEALARVHDPVYGCIAHIFALQQQVAVLKEEIETIE 105 6***********************9978*******************************************************************9987 PP DUF260 99 ee 100 + TEY80004.1 106 MQ 107 66 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MTGASSSCGA CKFLRRRCTP DCTFTPYFSY EQAASHFSAV HRVFGASNVS KMLLRLPLHS 60 RGDAAAMICY EALARVHDPV YGCIAHIFAL QQQVAVLKEE IETIEMQMAS ARSLDPLAPT 120 QISAHVSVNQ TSCPNEMEQN AVQKLLQDIH QDYYLYQPE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06080.1 | 3e-53 | LBD family protein |