PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY79311.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 333aa MW: 36716.9 Da PI: 10.1886

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY79311.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.9	8.5e-06	77	99	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H TEY79311.1 77 FVCEICNKGFQRDQNLQLHRRGH 99 89*******************88 PP
2	zf-C2H2	12.9	0.00034	153	175	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ TEY79311.1 153 WKCEKCSKIYAVQSDWKAHSKTC 175 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MFPMAIPNSI ENGSRARVNR DIGTLNSMPP NSTTITATAP APPQVKPRKK RNLPGNPHPD 60 AEVIALSPKT LMTANRFVCE ICNKGFQRDQ NLQLHRRGHN LPWKLKQRST KEARKRAYVC 120 PEPSCLHHHP SRALGDLTGI KKHYCRKHGE KKWKCEKCSK IYAVQSDWKA HSKTCGTREY 180 RCDCGTLFSS VYLKKVQGSL LSQTQSWVQN LTTPPATAPA ATQPYLFTPP NILSFSPGHH 240 RHFGQPWGPQ PPQNPNPEHT LAPQLYQGMG SVAAAVGPSS SMAWQRGCGS DVLTRDFLGL 300 TGGGGREELL PLVKLSAFER DHGGGGRCEC FGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	3e-92	C2H2 family protein