PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY79310.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 326aa MW: 36329.4 Da PI: 10.1061

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY79310.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.9	8.3e-06	50	72	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H TEY79310.1 50 FVCEICNKGFQRDQNLQLHRRGH 72 89*******************88 PP
2	zf-C2H2	12.9	0.00033	126	148	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ TEY79310.1 126 WKCEKCSKIYAVQSDWKAHSKTC 148 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence
MFPMAIPNSI ENGSRTRVKP KKKRNLPGNP DPDAEVIALS PKTLMTANRF VCEICNKGFQ 60 RDQNLQLHRR GHNLPWKLKQ RSTKEARKRA YVCPEPSCLH HHPSRALGDL TGIKKHYCRK 120 HGEKKWKCEK CSKIYAVQSD WKAHSKTCGT REYRCDCGTL FSRKDSFITH RAFCDALAEE 180 SARLSAVTNS ILAPNPDFPP PPAPGPAATQ PYLFTPGHHR HFGQPWGPQP HQNPNPMNLS 240 HAEQHLAPQL YQGMRSVAAA AVGPSSSMVW QRGGGGSDVL TRDFLGLTGG GGREELLPLV 300 KLSAFERDHS YVMRQHGFGF GGWGNC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-111	C2H2 family protein