PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY79181.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 1260aa MW: 137629 Da PI: 4.7753

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY79181.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.7	0.00038	414	435	3	23
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 C++C+ +F++k+++ +H+++ H TEY79181.1 414 CHKCNITFKDKDEFLNHQSSlH 435 ******************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 1260 aa Download sequence
MASATVDSAA TATATASTTD GGLLRLDSIP TVDLRLLSQS ELYSLSRCSS AAADPNCRDD 60 VVIPIIDRSV FNESAGSRKQ TYSRLRLAPT DSSSPATPRS RTPHLRSPAA AYGSINTKTD 120 PENVENHQII NLLKQFFVAD MDPADLFPVK IEYLNSLQPQ QLSSPPSPPP ANISSIGVKR 180 KRGRPRKAVE VSVIDGSYAD TLQLPMPSLS EFIPRDNAED KDREVLNSDG VAVDLAALGA 240 SEHPYREEIR QRTDGMRTEE ELLGFLTGLN GRWGSRRKKK RIVDANEFGS KLPVGWKLSL 300 SVKKKNGNVW LYCRRYISPS GLHFVTCKGV SSYLLSLHGM QDTNRCTFVQ YNDIVNDADK 360 LTTVPLVVQD DYEIETFSHA PSPPLDLVTA NPETQVTLNV GNASEDRIGE SLCCHKCNIT 420 FKDKDEFLNH QSSLHRKNRN KNIVRITDGV IIKDGKYECQ FCHKTFSERH RYNGHVGTHV 480 RFQPKMVGEF SQSVYPTSVN VYPTQDNAVE GSSKSNNAMD VCNSITNNGP TIYSNHDKID 540 GHFGELEDGS RNIRGMDRAT DTVTETNHSS VLEVLFTSNE NKSSHNDAGL NDSAAEINKD 600 GSMMQGGMMM ESTLSQNGAA DSDMTVSVIE NSVSTDNPMQ SMASECLLDS NDHTEECPVG 660 NDNQHRRNDS NQQTMELNFD SQNLGLNESV FSLFGTQGQG QQEKDLAVSK SDLEILPCKD 720 IATTESVTSG QEASKLEKGP NISMPIADNG KACKEDNVPC SAVTCKVGDT LGFSKCENDS 780 SKANNEGANM HEELQYGMDS VIQTWNTQEN ATNKDVSEVF THLLDVPGVH GMSESQLAAA 840 NDKDTYHYEN NDGRVCGRET KMPEFDCLQN FGSGQTSDLF SSSSAIVSSN SITGANQDTR 900 LGVCSPFIST TDEQLSAEDN MITMFNDAMK EHRQDPSEGI LLNQSGISEV SNGAFSSDKV 960 YTTANPSELN GIKIAGKHEL SLSFGSLQTD MCAESNRVKQ ESYRGNSFNI EPVGLKTYGN 1020 PTRSSILSSN IAADMEQARP FGYSNISFND TTNEPGNSFN VVQGERDWDG TRGNEVRTSS 1080 QNFMGAFGNS SLPTSECAAA DGSWRNGPAN LFGGCYDANS APHIQSSSFF PTFGLAPTMG 1140 QESSFGVDHN YGIQSDMMRP ARAQPVEYSF MSEQRVNSLP GEAKNFPYGT NMEQEMDPSF 1200 WLGKDALTPN ASRISQATPI CVWCRNVFLN EHVEAGVQTG AIGTICPSCS SRIPGHFNML

Sequence ? help Back to Top

Protein Sequence Length: 1260 aa Download sequence

MASATVDSAA TATATASTTD GGLLRLDSIP TVDLRLLSQS ELYSLSRCSS AAADPNCRDD  60
VVIPIIDRSV FNESAGSRKQ TYSRLRLAPT DSSSPATPRS RTPHLRSPAA AYGSINTKTD  120
PENVENHQII NLLKQFFVAD MDPADLFPVK IEYLNSLQPQ QLSSPPSPPP ANISSIGVKR  180
KRGRPRKAVE VSVIDGSYAD TLQLPMPSLS EFIPRDNAED KDREVLNSDG VAVDLAALGA  240
SEHPYREEIR QRTDGMRTEE ELLGFLTGLN GRWGSRRKKK RIVDANEFGS KLPVGWKLSL  300
SVKKKNGNVW LYCRRYISPS GLHFVTCKGV SSYLLSLHGM QDTNRCTFVQ YNDIVNDADK  360
LTTVPLVVQD DYEIETFSHA PSPPLDLVTA NPETQVTLNV GNASEDRIGE SLCCHKCNIT  420
FKDKDEFLNH QSSLHRKNRN KNIVRITDGV IIKDGKYECQ FCHKTFSERH RYNGHVGTHV  480
RFQPKMVGEF SQSVYPTSVN VYPTQDNAVE GSSKSNNAMD VCNSITNNGP TIYSNHDKID  540
GHFGELEDGS RNIRGMDRAT DTVTETNHSS VLEVLFTSNE NKSSHNDAGL NDSAAEINKD  600
GSMMQGGMMM ESTLSQNGAA DSDMTVSVIE NSVSTDNPMQ SMASECLLDS NDHTEECPVG  660
NDNQHRRNDS NQQTMELNFD SQNLGLNESV FSLFGTQGQG QQEKDLAVSK SDLEILPCKD  720
IATTESVTSG QEASKLEKGP NISMPIADNG KACKEDNVPC SAVTCKVGDT LGFSKCENDS  780
SKANNEGANM HEELQYGMDS VIQTWNTQEN ATNKDVSEVF THLLDVPGVH GMSESQLAAA  840
NDKDTYHYEN NDGRVCGRET KMPEFDCLQN FGSGQTSDLF SSSSAIVSSN SITGANQDTR  900
LGVCSPFIST TDEQLSAEDN MITMFNDAMK EHRQDPSEGI LLNQSGISEV SNGAFSSDKV  960
YTTANPSELN GIKIAGKHEL SLSFGSLQTD MCAESNRVKQ ESYRGNSFNI EPVGLKTYGN  1020
PTRSSILSSN IAADMEQARP FGYSNISFND TTNEPGNSFN VVQGERDWDG TRGNEVRTSS  1080
QNFMGAFGNS SLPTSECAAA DGSWRNGPAN LFGGCYDANS APHIQSSSFF PTFGLAPTMG  1140
QESSFGVDHN YGIQSDMMRP ARAQPVEYSF MSEQRVNSLP GEAKNFPYGT NMEQEMDPSF  1200
WLGKDALTPN ASRISQATPI CVWCRNVFLN EHVEAGVQTG AIGTICPSCS SRIPGHFNML

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	276	281	RRKKKR
2	276	305	RRKKKRIVDANEFGSKLPVGWKLSLSVKKK
3	277	306	RRKKKRIVDANEFGSKLPVGWKLSLSVKKK
4	278	307	RRKKKRIVDANEFGSKLPVGWKLSLSVKKK