PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY79097.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 553aa MW: 61004.5 Da PI: 7.4965

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY79097.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.4	6.6e-12	205	261	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++ +++Aa+a++ a++k++g TEY79097.1 205 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqTRKGRQ-GGYDMEDKAARAYDLAALKYWG 261 78*****************77776664346655.7799************98 PP
2	AP2	46.8	7.5e-15	304	355	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g TEY79097.1 304 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 355 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 553 aa Download sequence
MKDINDDGDI NTWLGFSLSP HMKIEPNSHH HHFSHSHSPP TTTSSAAAAY LSNFAIDDAP 60 LSVMPLKSDG SLCLMEALSR SHPHAVPPQP KLEDFLGAAS NQAMDFYTHQ NHYFSNYTFY 120 QHHQIPEEES FKTWEENAMR SNEIQSLSLS MSPGSQSSCI TASRPAEITE SAAMGSKKRG 180 AEKLGQQQKQ TVHRKSIDTF GQRTSQYRGV TRHRWTGRYE AHLWDNSCKK EGQTRKGRQG 240 GYDMEDKAAR AYDLAALKYW GPSTHINFGL ENYHQELEDM KNMSRQEYVA HLRRKSSGFS 300 RGASIYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGVNAVT 360 NFDISRYDVE KIMASSTLPT GEVARRTKEG RPSASVEECH GGEAPPLAVA ARGEHVSNAC 420 DWKMVPYNDA PGQGQGHQGS VGVGTLEVKT LNLGSYQSPA FSTGLHDLIG LDTSQRAVHE 480 STTSTMAPHF SNASSLVTSL SSSREASPDR YGDGPSRFVG PSSNMGAWIP TAQLRPVLLT 540 TAQLPAFASW NDA

Sequence ? help Back to Top

Protein Sequence Length: 553 aa Download sequence

MKDINDDGDI NTWLGFSLSP HMKIEPNSHH HHFSHSHSPP TTTSSAAAAY LSNFAIDDAP  60
LSVMPLKSDG SLCLMEALSR SHPHAVPPQP KLEDFLGAAS NQAMDFYTHQ NHYFSNYTFY  120
QHHQIPEEES FKTWEENAMR SNEIQSLSLS MSPGSQSSCI TASRPAEITE SAAMGSKKRG  180
AEKLGQQQKQ TVHRKSIDTF GQRTSQYRGV TRHRWTGRYE AHLWDNSCKK EGQTRKGRQG  240
GYDMEDKAAR AYDLAALKYW GPSTHINFGL ENYHQELEDM KNMSRQEYVA HLRRKSSGFS  300
RGASIYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGVNAVT  360
NFDISRYDVE KIMASSTLPT GEVARRTKEG RPSASVEECH GGEAPPLAVA ARGEHVSNAC  420
DWKMVPYNDA PGQGQGHQGS VGVGTLEVKT LNLGSYQSPA FSTGLHDLIG LDTSQRAVHE  480
STTSTMAPHF SNASSLVTSL SSSREASPDR YGDGPSRFVG PSSNMGAWIP TAQLRPVLLT  540
TAQLPAFASW NDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-128	AP2 family protein