PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY78096.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 246aa MW: 28291.4 Da PI: 8.2353 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 100.2 | 8.2e-32 | 52 | 101 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krienk+nrqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gklye+ TEY78096.1 52 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 101 79**********************************************95 PP | |||||||
2 | K-box | 70.5 | 5.2e-24 | 103 | 166 | 35 | 98 |
K-box 35 qRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 RhllGedL++Ls+keLq+Le+qLe +l++ R +K+++l+eq+eel++ke+el + nk+L+ k+ TEY78096.1 103 TRHLLGEDLGPLSIKELQNLEKQLEGALSQARLRKTQILVEQMEELRRKERELGDMNKQLKIKI 166 6***********************************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MFMCIYEGKE FSDTPYLFII NTSPHPIHTH SHTESDRERE REKMGRGRVE LKRIENKINR 60 QVTFSKRRNG LLKKAYELSV LCDAEVALII FSSRGKLYEF GSTRHLLGED LGPLSIKELQ 120 NLEKQLEGAL SQARLRKTQI LVEQMEELRR KERELGDMNK QLKIKISLEM SSLDAERQGL 180 RALPSPWTLT SSEASSFPLQ IQASNPMQME PEPFLQIGYH HYNLGEGPSA STRMAVDNNM 240 VQGWTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 6e-69 | MIKC_MADS family protein |