PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY77984.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 580aa MW: 63287.6 Da PI: 7.7607

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY77984.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.3	7e-12	223	279	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++ +++Aa+a++ a++k++g TEY77984.1 223 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqTRKGRQ-GGYDMEDKAARAYDLAALKYWG 279 78*****************77776664346655.7799************98 PP
2	AP2	46.7	8e-15	322	373	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g TEY77984.1 322 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 373 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 580 aa Download sequence
MKDINDTTTA AAAADISSWL GFSLSPHMKM EAAAAAATPS SAATQNNSNN FYLSNSGAIF 60 AGADFHAPLS VMPLKSDGSL CLMEALSQSH PPPPKLEDFL GAATIAAATN QEMDFYTHQN 120 HYFSNYSFYQ HQIPQIPEEE IAPCLKTWMD HSHSLTEAAA PPQSLSLSMS PGSQSSCITA 180 SLHLSETTES AAMETKKRGA QKLGQQKQTV HRKSIDTFGQ RTSQYRGVTR HRWTGRYEAH 240 LWDNSCKKEG QTRKGRQGGY DMEDKAARAY DLAALKYWGP STHINFGLEN YHQELEDMKN 300 MSRQEYVAHL RRKSSGFSRG ASIYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA 360 AEAYDIAAIK FRGVNAVTNF DISRYDVEKI MASNTLPTGE VARRTKEGRP AAEVASVEEC 420 HASTQRVELC GSSAQVEHVS NGCDWKMVLH SDAPVVQAPS GHQGSVGVGS LDVKTLNLGS 480 YQSPTFSVGL HEMMGGLNSS QRGVSNATMA PHFSNASSLV TSLSSSREAS PERYGGPNKL 540 VTPPANVGAW IPTTQIRPMQ LTTAHMPVFA AWNDAGRQLL

Sequence ? help Back to Top

Protein Sequence Length: 580 aa Download sequence

MKDINDTTTA AAAADISSWL GFSLSPHMKM EAAAAAATPS SAATQNNSNN FYLSNSGAIF  60
AGADFHAPLS VMPLKSDGSL CLMEALSQSH PPPPKLEDFL GAATIAAATN QEMDFYTHQN  120
HYFSNYSFYQ HQIPQIPEEE IAPCLKTWMD HSHSLTEAAA PPQSLSLSMS PGSQSSCITA  180
SLHLSETTES AAMETKKRGA QKLGQQKQTV HRKSIDTFGQ RTSQYRGVTR HRWTGRYEAH  240
LWDNSCKKEG QTRKGRQGGY DMEDKAARAY DLAALKYWGP STHINFGLEN YHQELEDMKN  300
MSRQEYVAHL RRKSSGFSRG ASIYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFSTQEEA  360
AEAYDIAAIK FRGVNAVTNF DISRYDVEKI MASNTLPTGE VARRTKEGRP AAEVASVEEC  420
HASTQRVELC GSSAQVEHVS NGCDWKMVLH SDAPVVQAPS GHQGSVGVGS LDVKTLNLGS  480
YQSPTFSVGL HEMMGGLNSS QRGVSNATMA PHFSNASSLV TSLSSSREAS PERYGGPNKL  540
VTPPANVGAW IPTTQIRPMQ LTTAHMPVFA AWNDAGRQLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-133	AP2 family protein