PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY77039.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 377aa MW: 42386.7 Da PI: 9.2056

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY77039.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	52.2	1.5e-16	57	116	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d s+n k+ k+++lg ++ +e Aa+a++ a++k++g TEY77039.1 57 SKYRGVSRHRWTGRYEAHLWDkLSWNTsqkKKgKQVYLGAYDDEEAAARAYDLAALKYWG 116 89*****************888877776447***********************98 PP
2	AP2	52.5	1.3e-16	159	210	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g TEY77039.1 159 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 210 89**99******99966...3.6***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MAMAMRMIKS EARLHAAMHD DTTRVKRRRR DPSVSEDKAS VAEPKQAAAA TTVKRSSKYR 60 GVSRHRWTGR YEAHLWDKLS WNTSQKKKGK QVYLGAYDDE EAAARAYDLA ALKYWGTSTF 120 TNFPISDYEV EIGVMQSTTK EEYLASLRRK SSGFSRGVSK YRGVARHHHN GRWEARIGRV 180 FGNKYLYLGT YSTQEEAARA YDIAAIEYRG INAVTNFDLS NYIRWLKPGA NAPVAAAQDT 240 KMGIDLPPLA PAYLAREESQ PLSPCLKRKA YSAADLQESF SCKNPMSPCS KPSPTALSLL 300 FRSSLFRELL EKNSYVSEEE IQDGNTQIEK MVGSGDGYGG MFSNESEDIP FVLSANRHTI 360 ELQGQLDLEY SCPDSIF

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MAMAMRMIKS EARLHAAMHD DTTRVKRRRR DPSVSEDKAS VAEPKQAAAA TTVKRSSKYR  60
GVSRHRWTGR YEAHLWDKLS WNTSQKKKGK QVYLGAYDDE EAAARAYDLA ALKYWGTSTF  120
TNFPISDYEV EIGVMQSTTK EEYLASLRRK SSGFSRGVSK YRGVARHHHN GRWEARIGRV  180
FGNKYLYLGT YSTQEEAARA YDIAAIEYRG INAVTNFDLS NYIRWLKPGA NAPVAAAQDT  240
KMGIDLPPLA PAYLAREESQ PLSPCLKRKA YSAADLQESF SCKNPMSPCS KPSPTALSLL  300
FRSSLFRELL EKNSYVSEEE IQDGNTQIEK MVGSGDGYGG MFSNESEDIP FVLSANRHTI  360
ELQGQLDLEY SCPDSIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	3e-81	AP2 family protein