PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY76684.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 473aa MW: 52069.9 Da PI: 5.2867 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 37.9 | 4.6e-12 | 139 | 195 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d + ++ ++ k + g ++ +e+Aa+a++ a++k++g TEY76684.1 139 SQYRGVTRHRWTGRYEAHLWDnSC-RKegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 195 78*******************433.44555535555.779999**************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 473 aa Download sequence |
MNGSNPNEEV PKFEDFLGCC YSNSPQNEPG EINMNMPPNF DDQKREEGFN NPPLFYPPYQ 60 YASAGAYFGG GEGLKTWLEK PAAEGGDRQA LSLTVHPSSQ VVAPLQAVAE GKKRAVAKSG 120 AAKEAVPRKS IDTFGQRTSQ YRGVTRHRWT GRYEAHLWDN SCRKEGQTRK GRQGGYDKEE 180 KAARAYDLAA LKYWGPTTHI NFPLSDYERE LEDMKSMTRQ EFVAHLRRKS SGFSRGASMY 240 RGVTRWFARI SDIFCIINMG DGKPELEELQ AIRTCTLLMV VEKELNFESY LGTQEEAAEA 300 YDIAAIKFRG TSAVTNFDIS RYDVKRICSS STLIAGDLAK RSPKHPGLAG VEDYNSCASS 360 ASPQAPLLIT NGEERGEAEE LADMMWNAHP DDNRATKDDT QPGQGQGSGE SPGPHMSPPR 420 MDQVIGDGGG YSRGYFLEGQ KYVDVGCDLG GSGRAGPDVG LVQEAPTFAL WSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G72570.1 | 4e-97 | AP2 family protein |