PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY76215.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

FAR1

Protein Properties

Length: 410aa MW: 47177.2 Da PI: 8.9671

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY76215.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.1	1.5e-18	30	117	1	81
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 +fYn+YA+e+GFs r s+s+k+k+++e+++++fvC k g+++e ++k + r r e rt+Ckak+ + k++ + w v+ + TEY76215.1 30 EFYNQYAREAGFSARYSNSRKNKMTNEVVWKQFVCFKAGQTDEARSKnraptgGPIQIRARGEVRTNCKAKISIVKQQaGSDWSVSVF 117 6**************************************999888677765555667999********99999899999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MNDQLYIPQV ANDRKPEIGM KFQSIDDAFE FYNQYAREAG FSARYSNSRK NKMTNEVVWK 60 QFVCFKAGQT DEARSKNRAP TGGPIQIRAR GEVRTNCKAK ISIVKQQAGS DWSVSVFIVL 120 TQQFSEANIP TYQQMQLLEM ESGGPESVGC TERDIRNLER ELRDEQKGID AETLIEFFTS 180 EKEKNSSFFF DYETDSDHIF KRCFWADPKS RRAYGAFGDV VVFDSTYNTN KHMLAFFRVN 240 QIFELPDKYI LKRWTREAKI GVAYILDDEN CNDDPTRFLI SRRAKLSYKA STLIDYASLT 300 DEGTKFLDEQ LDYIHGKIKE MGISPTTMHR SQTRKSLDKT KTIGDPSKIR SKGCGKRMLS 360 SKEKSILKTR ACHGCGLRGA SHDKRNCPKL QDRSVAYDHY DISQYANERA

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MNDQLYIPQV ANDRKPEIGM KFQSIDDAFE FYNQYAREAG FSARYSNSRK NKMTNEVVWK  60
QFVCFKAGQT DEARSKNRAP TGGPIQIRAR GEVRTNCKAK ISIVKQQAGS DWSVSVFIVL  120
TQQFSEANIP TYQQMQLLEM ESGGPESVGC TERDIRNLER ELRDEQKGID AETLIEFFTS  180
EKEKNSSFFF DYETDSDHIF KRCFWADPKS RRAYGAFGDV VVFDSTYNTN KHMLAFFRVN  240
QIFELPDKYI LKRWTREAKI GVAYILDDEN CNDDPTRFLI SRRAKLSYKA STLIDYASLT  300
DEGTKFLDEQ LDYIHGKIKE MGISPTTMHR SQTRKSLDKT KTIGDPSKIR SKGCGKRMLS  360
SKEKSILKTR ACHGCGLRGA SHDKRNCPKL QDRSVAYDHY DISQYANERA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-27	FAR1 family protein