PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY74147.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C2H2
Protein Properties Length: 350aa    MW: 39537.3 Da    PI: 9.5086
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY74147.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.89.1e-061234123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++C+k F r  nL+ H r H
  TEY74147.1 12 FVCEICNKGFQRDQNLQLHRRGH 34
                89*******************88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MSPKSLMATN RFVCEICNKG FQRDQNLQLH RRGHNLPWKL KQRNKEEVVR KKVYICPEKT  60
CAHHHPSRAL GDLTGIKKHY SRKHGEKKWK CDKCSKKYAV MSDWKAHNKI CGTREYKCDC  120
GTLFSRKDSF ITHRAFCDAL VEESARFSNR NGLVMDAFQN NSNNNVDFSG VFESGSQINR  180
FPLWLESANY PNSSNENTFL NTNASRLQEE IIHQQLDSQS QWLSRGQEEE SFLGGVLKEE  240
DNKSSLSQTP SSLYYTHQTA AAPMSATALL HKAAQMGSTR SVAGFGLMSP SSFSSSARGK  300
DDQGSKNQRV IEGESSLTRD FLGVGGKELK SNFFASMSST MEMGNYNRNH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13952KLKQRNKEEVVRKK
24154KLKQRNKEEVVRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G45260.13e-94C2H2 family protein