PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY73809.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 221aa    MW: 24389.9 Da    PI: 6.3291
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY73809.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260125.23.2e-3971071100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC k+Cv++pyf++eq + +fa +hk+FGasnv+kll++lp ++r++a+ +l+yeA+ar++dP+yG+v++i++lqqq+ +l+a+la+lk
  TEY73809.1   7 PCGACKFLRRKCIKGCVFSPYFCHEQgATHFASIHKVFGASNVSKLLAHLPVSDRSEAAITLAYEAQARLQDPIYGCVSHIFSLQQQVVNLQAQLASLK 105
                 7*************************89*********************************************************************99 PP

      DUF260  99 ee 100
                 ++
  TEY73809.1 106 QQ 107
                 98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MTGSSSPCGA CKFLRRKCIK GCVFSPYFCH EQGATHFASI HKVFGASNVS KLLAHLPVSD  60
RSEAAITLAY EAQARLQDPI YGCVSHIFSL QQQVVNLQAQ LASLKQQAAQ CIINNSNSSS  120
SANPNPNDHK FYGENNSPPQ DLHSWLQNQM ETPQFDANNT YNYGGRMDLS ASAYVKHENS  180
NFGEQNPSYG SMDSFEDQQW PYQDAGDDLQ SVAFGHLHLS C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42440.11e-52LBD family protein