PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY73643.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 481aa MW: 54291.2 Da PI: 5.4157

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY73643.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	77.7	1.7e-24	69	151	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++aLi +r+e++ ++++k++k+lW+ +s kmrergf rsp++C++kw+nl k+ykk k+++ + s++ ++ +++++e TEY73643.1 69 WAQEETRALISLRKEIDFLFNTSKSNKHLWDNISMKMRERGFDRSPTMCTDKWRNLLKEYKKAKQNNPDT-SGNC-KMNFYKDIE 151 ********************************************************************95.5555.799999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MYSEKAQAQE ESAIDFYSSK QGSPNENNMI IQISGGGGAT TSGGEDPSIA ANQNPLPPSP 60 APKKRAETWA QEETRALISL RKEIDFLFNT SKSNKHLWDN ISMKMRERGF DRSPTMCTDK 120 WRNLLKEYKK AKQNNPDTSG NCKMNFYKDI EEIMRERSKN GNCWKNSATS SDAAAAAGSK 180 VESFMQFADK GDMIFSIGFF VLLCLLDSKM WAMWKHISVF PLCLIFGNAR AYDPLLPSAV 240 GLLWDSRRES VRVDELQHSL ILSRVVVVDM RHTDIFCALI EGIDDASLTF GPVEGNGRSA 300 LNLETRLDHE PHPLAITAAD AVVASGVSPW NWRETPTENG EDRNTFDGRV ITVKLGDYTK 360 RIGIDGTGDA IKEAIKSAFR LRTKRAFWLE DEDNVVRSLD REMPLGNYTL HVDEGLTIKV 420 CLFDGPEHLP VHTEEKTFYT EDDFRQFLSR RCWTCLREYD GYRNIDSMDE LCPGALYRGV 480 N

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MYSEKAQAQE ESAIDFYSSK QGSPNENNMI IQISGGGGAT TSGGEDPSIA ANQNPLPPSP  60
APKKRAETWA QEETRALISL RKEIDFLFNT SKSNKHLWDN ISMKMRERGF DRSPTMCTDK  120
WRNLLKEYKK AKQNNPDTSG NCKMNFYKDI EEIMRERSKN GNCWKNSATS SDAAAAAGSK  180
VESFMQFADK GDMIFSIGFF VLLCLLDSKM WAMWKHISVF PLCLIFGNAR AYDPLLPSAV  240
GLLWDSRRES VRVDELQHSL ILSRVVVVDM RHTDIFCALI EGIDDASLTF GPVEGNGRSA  300
LNLETRLDHE PHPLAITAAD AVVASGVSPW NWRETPTENG EDRNTFDGRV ITVKLGDYTK  360
RIGIDGTGDA IKEAIKSAFR LRTKRAFWLE DEDNVVRSLD REMPLGNYTL HVDEGLTIKV  420
CLFDGPEHLP VHTEEKTFYT EDDFRQFLSR RCWTCLREYD GYRNIDSMDE LCPGALYRGV  480
N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	3e-91	Trihelix family protein