PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY72879.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

bHLH

Protein Properties

Length: 606aa MW: 67495.1 Da PI: 8.0139

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY72879.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.5	1e-12	437	483	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq TEY72879.1 437 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYITELQ 483 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 606 aa Download sequence
MGVVGWSNED KAMAAAVLGT KAFDYLSSSS VSAECSLMGM GNDENLQNKL ADLVERPNSS 60 NFSWNYAIFW QLSRSKAGDL VLGWGDGCCR EPRVDEESEV TRILKMRLED ESQQTMRKRV 120 LQRLHTLFGG GGEENYAFGL DKVTDTEMFF LASMYFSFPR GEGGPGRCFG SSRHVWLLDA 180 LKSSVDFCVR SFLAKSAGMQ TIVLIPTDVG VLELGSVRCI PESMELVKMV GSSFSSFSSL 240 NRSKQTAAAA LATVMNKKET NGHIPNLAIR DRPEVVPKIF GQDLKSSNVQ FRENVSIRKP 300 EVQERTWDAS GNRNKVPFTN NSNGFHGATW TQYSNLKRGN PLEVYSPQTP AKRPAEIVNG 360 NREEFMINNF QHQKSAQMQI DFTGATSRPL TPHPQSLESE LSDVEASCKE EAAGLSEDKR 420 PRKRGRKPAN GRDEPLNHVE AERQRREKLN QRFYALRAVV PNISKMDKAS LLGDAIAYIT 480 ELQKKLKDME SEREGVGSIS REASVSETYS NREKQDLLAS SINIEADREE VTVRVSCPLE 540 THPASRVIQA IDDAQATIVD AKMATGSERV FHTFVVKSLG SERLTREKLL EAFSRRSRSP 600 HQLSLG

Sequence ? help Back to Top

Protein Sequence Length: 606 aa Download sequence

MGVVGWSNED KAMAAAVLGT KAFDYLSSSS VSAECSLMGM GNDENLQNKL ADLVERPNSS  60
NFSWNYAIFW QLSRSKAGDL VLGWGDGCCR EPRVDEESEV TRILKMRLED ESQQTMRKRV  120
LQRLHTLFGG GGEENYAFGL DKVTDTEMFF LASMYFSFPR GEGGPGRCFG SSRHVWLLDA  180
LKSSVDFCVR SFLAKSAGMQ TIVLIPTDVG VLELGSVRCI PESMELVKMV GSSFSSFSSL  240
NRSKQTAAAA LATVMNKKET NGHIPNLAIR DRPEVVPKIF GQDLKSSNVQ FRENVSIRKP  300
EVQERTWDAS GNRNKVPFTN NSNGFHGATW TQYSNLKRGN PLEVYSPQTP AKRPAEIVNG  360
NREEFMINNF QHQKSAQMQI DFTGATSRPL TPHPQSLESE LSDVEASCKE EAAGLSEDKR  420
PRKRGRKPAN GRDEPLNHVE AERQRREKLN QRFYALRAVV PNISKMDKAS LLGDAIAYIT  480
ELQKKLKDME SEREGVGSIS REASVSETYS NREKQDLLAS SINIEADREE VTVRVSCPLE  540
THPASRVIQA IDDAQATIVD AKMATGSERV FHTFVVKSLG SERLTREKLL EAFSRRSRSP  600
HQLSLG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	419	427	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	0.0	bHLH family protein