PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY72761.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 520aa MW: 58402 Da PI: 8.3164

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY72761.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.4	2.4e-16	59	105	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd+ l +av + g++Wk+Ia+ ++ +R++ qc +rwqk+l TEY72761.1 59 KGGWTPEEDDTLRKAVSAFRGKSWKKIAEFFP-HRSEVQCLHRWQKVL 105 688***************************.**********986 PP
2	Myb_DNA-binding	61.9	1.3e-19	111	157	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde++ ++v+++G+ W+ Ia+ ++ gR +kqc++rw+++l TEY72761.1 111 KGPWTPEEDEKITKLVAKYGPTKWSVIAKSLP-GRIGKQCRERWHNHL 157 79****************************.***********97 PP
3	Myb_DNA-binding	39.6	1.2e-12	163	210	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqk 46 +++WT +E++ l++a++ G++ W+ a+ ++ Rt++ +k++w++ TEY72761.1 163 KDAWTLDEELTLLNAHRINGNK-WAELAKLLPgsvPIRTDNAIKNHWNS 210 679*****************.********99********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MAEVKFDDIC LENKESTVAS SSSVSENSSS SALKSLGATS PRSVSPAHRR TTGPIRRAKG 60 GWTPEEDDTL RKAVSAFRGK SWKKIAEFFP HRSEVQCLHR WQKVLNPELV KGPWTPEEDE 120 KITKLVAKYG PTKWSVIAKS LPGRIGKQCR ERWHNHLNPD IKKDAWTLDE ELTLLNAHRI 180 NGNKWAELAK LLPGSVPIRT DNAIKNHWNS SLKKKLEFYL ATGSLPPVSK NVLLNGARDI 240 SRITLVRSPV LASCDTIESC KVKDGKDKLD AILADHDVAA YRQCESMNPE GTNCLAVTTH 300 SNTESEFERQ RFCGEVDQYR IIGTAVHCDT PIYETLYYEP PVIESHGQLD SNLGNTFLMQ 360 PEADVTALSP TPFITPPSVN SRSLYMQTPE SILRNAAKSF PITPSILRKR KSELQQPKET 420 VISNTDHDQT NSSENTGLQN NCLCENPTCD NEDGLSSNQS FNSSPPYRLR FKRTSVLKSV 480 EKQLDFTTVM EHDCCDYNLK DGEVKKVPPV TKFVYTRQKR

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MAEVKFDDIC LENKESTVAS SSSVSENSSS SALKSLGATS PRSVSPAHRR TTGPIRRAKG  60
GWTPEEDDTL RKAVSAFRGK SWKKIAEFFP HRSEVQCLHR WQKVLNPELV KGPWTPEEDE  120
KITKLVAKYG PTKWSVIAKS LPGRIGKQCR ERWHNHLNPD IKKDAWTLDE ELTLLNAHRI  180
NGNKWAELAK LLPGSVPIRT DNAIKNHWNS SLKKKLEFYL ATGSLPPVSK NVLLNGARDI  240
SRITLVRSPV LASCDTIESC KVKDGKDKLD AILADHDVAA YRQCESMNPE GTNCLAVTTH  300
SNTESEFERQ RFCGEVDQYR IIGTAVHCDT PIYETLYYEP PVIESHGQLD SNLGNTFLMQ  360
PEADVTALSP TPFITPPSVN SRSLYMQTPE SILRNAAKSF PITPSILRKR KSELQQPKET  420
VISNTDHDQT NSSENTGLQN NCLCENPTCD NEDGLSSNQS FNSSPPYRLR FKRTSVLKSV  480
EKQLDFTTVM EHDCCDYNLK DGEVKKVPPV TKFVYTRQKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-131	MYB family protein