PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY72437.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 932aa MW: 105502 Da PI: 5.031

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY72437.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.2	9.3e-14	8	53	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l TEY72437.1 8 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 53 78***************************.**********986 PP
2	Myb_DNA-binding	32.9	1.5e-10	60	103	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l TEY72437.1 60 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 103 68***************99.****8..********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 932 aa Download sequence
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT 60 EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACAKD ENYEPGDDPR 120 KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR 180 LASLQKRREL KAAGINLRHK KRKRKGIDYN AEIPFEKRPP PGFYDIADED RPAELVKFPT 240 TIEELEGERR VDKEARLRKQ DIARNKIAER QDAPSAILQA NKLNDPEAVR KRSRLNLPAP 300 QIPDHELEAI AKMGIASDLL GNEELTEGNA ATRALLANYA QTPRYGMTPG RTPQRTPAGK 360 QDAIMMEAEN QRRLTLSQTP LLGGDNPMLH PSDFSGVTPK KKDIATPNPL MTPSATPGGA 420 TPAGPGLTPR IGMTPTRDVY AVGLTPKGTS MRDELRINED IDMHDISKVR QSDSKKELIF 480 GLKNLPQPKN DYQIVIQPLA EEDEELEEKI EEDMSDRIAR EKAEEEARQQ ALLKKRSKVL 540 QRELPRPPVA SLDLIRNTLM RSDEDKSSVV PSTLVEQAEE LIRKELLSLL EHDNIKYPLD 600 EKATKEKKKG KRAAKDNSID VPTIDEFEED ELKEADKFIE DEVQYLRVAM GHENESFEGY 660 VEAHKTCLDD MMYFPTRDGF GLASVANHAE KLSSLQNEFE HVKKKMDDET KKAQRHEQKI 720 KVLTNGYQMR CNKLWAQLEA TFKQMDTAGT ELECFQALSK QETLAATYRI SNLWEEVQKQ 780 KDLERTLQKR YGDRMAELES IQHLVKAYRL QAERDLENAA KDNDTAMDAI DTTQDQSVAP 840 DLEAHKDVAT QEPDAAEEKA AVTKDKVEAD AVAAGDEVVA PTAEPEVQDS DETKGLDVEM 900 ESRSKDENDA TEENAESTTA ELQVAEESAG EA

Sequence ? help Back to Top

Protein Sequence Length: 932 aa Download sequence

MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT  60
EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACAKD ENYEPGDDPR  120
KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR  180
LASLQKRREL KAAGINLRHK KRKRKGIDYN AEIPFEKRPP PGFYDIADED RPAELVKFPT  240
TIEELEGERR VDKEARLRKQ DIARNKIAER QDAPSAILQA NKLNDPEAVR KRSRLNLPAP  300
QIPDHELEAI AKMGIASDLL GNEELTEGNA ATRALLANYA QTPRYGMTPG RTPQRTPAGK  360
QDAIMMEAEN QRRLTLSQTP LLGGDNPMLH PSDFSGVTPK KKDIATPNPL MTPSATPGGA  420
TPAGPGLTPR IGMTPTRDVY AVGLTPKGTS MRDELRINED IDMHDISKVR QSDSKKELIF  480
GLKNLPQPKN DYQIVIQPLA EEDEELEEKI EEDMSDRIAR EKAEEEARQQ ALLKKRSKVL  540
QRELPRPPVA SLDLIRNTLM RSDEDKSSVV PSTLVEQAEE LIRKELLSLL EHDNIKYPLD  600
EKATKEKKKG KRAAKDNSID VPTIDEFEED ELKEADKFIE DEVQYLRVAM GHENESFEGY  660
VEAHKTCLDD MMYFPTRDGF GLASVANHAE KLSSLQNEFE HVKKKMDDET KKAQRHEQKI  720
KVLTNGYQMR CNKLWAQLEA TFKQMDTAGT ELECFQALSK QETLAATYRI SNLWEEVQKQ  780
KDLERTLQKR YGDRMAELES IQHLVKAYRL QAERDLENAA KDNDTAMDAI DTTQDQSVAP  840
DLEAHKDVAT QEPDAAEEKA AVTKDKVEAD AVAAGDEVVA PTAEPEVQDS DETKGLDVEM  900
ESRSKDENDA TEENAESTTA ELQVAEESAG EA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	164	203	KKAKRKAREKQLEEARRLASLQKRRELKAAGINLRHKKRK
2	186	205	KRRELKAAGINLRHKKRKRK
3	200	205	KKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	0.0	MYB family protein