PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY72251.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

FAR1

Protein Properties

Length: 406aa MW: 46410.8 Da PI: 9.1149

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY72251.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	35.5	3.2e-11	31	68	2	39
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskeg 39 fYn+YA+e+GFs r s+skk+k+n+e ++++fvCsk TEY72251.1 31 FYNQYAREAGFSARSSSSKKNKKNNELVWKQFVCSKLQ 68 ***********************************965 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MNENLYIPQV ANDRKPEIGM RFATVDDAFA FYNQYAREAG FSARSSSSKK NKKNNELVWK 60 QFVCSKLQQT GPDWSVSVLV EGHNHGLSTP SKVHLLRSHR NVSTVKRVLT QNFSEANIPT 120 CQQMQLLEIE YGGPESIGCT ERDIRNFEKE LRDEQKGIDA ETLIEFFTSE KEKNKSFLFD 180 FETDSNNRHM LAFFRISQIS ELSDKYILKR WMWEAKIDVV YTINDENAND DPTKLLMSRH 240 SKLSYKAAIL IDDASLTDER TKFLDEQLDY IHGKIKEMGI SPTTKFSTQR RKNLDKSVSI 300 GDPSQIRKKG CGKRMLSSKE KSTVKPRACH GCGLRGVSRD KRNCPDLHDR SAAVQILELS 360 NKKEKTGSVK QVEGEYLALR QNGLTLFSKG VVIANLELIV FFMQLD

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MNENLYIPQV ANDRKPEIGM RFATVDDAFA FYNQYAREAG FSARSSSSKK NKKNNELVWK  60
QFVCSKLQQT GPDWSVSVLV EGHNHGLSTP SKVHLLRSHR NVSTVKRVLT QNFSEANIPT  120
CQQMQLLEIE YGGPESIGCT ERDIRNFEKE LRDEQKGIDA ETLIEFFTSE KEKNKSFLFD  180
FETDSNNRHM LAFFRISQIS ELSDKYILKR WMWEAKIDVV YTINDENAND DPTKLLMSRH  240
SKLSYKAAIL IDDASLTDER TKFLDEQLDY IHGKIKEMGI SPTTKFSTQR RKNLDKSVSI  300
GDPSQIRKKG CGKRMLSSKE KSTVKPRACH GCGLRGVSRD KRNCPDLHDR SAAVQILELS  360
NKKEKTGSVK QVEGEYLALR QNGLTLFSKG VVIANLELIV FFMQLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-19	FAR1 family protein