PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY72141.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 536aa MW: 60081.9 Da PI: 9.0684

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY72141.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.4	2.5e-16	79	125	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd+ l +av + g++Wk+Ia+ ++ +R++ qc +rwqk+l TEY72141.1 79 KGGWTPEEDDTLRKAVSAFRGKSWKKIAEFFP-HRSEVQCLHRWQKVL 125 688***************************.**********986 PP
2	Myb_DNA-binding	61.2	2.1e-19	131	177	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde++ ++v+++G+ W+ Ia+ ++ gR +kqc++rw+++l TEY72141.1 131 KGPWTQEEDEKITKLVAKYGPTKWSVIAKSLP-GRIGKQCRERWHNHL 177 79****************************.***********97 PP
3	Myb_DNA-binding	48.2	2.6e-15	183	226	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT +E++ l++a++ G++ W+ a+ ++ gRt++ +k++w++ TEY72141.1 183 KDAWTLDEELTLLNAHRINGNK-WAELAKLLP-GRTDNAIKNHWNS 226 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MARSLVVSIT IRFRDLDLGL MSEVKFGDIC LENKESTVAS SSSVSENSSS AALKSPGATS 60 PRSVSPAHRR TTGPIRRAKG GWTPEEDDTL RKAVSAFRGK SWKKIAEFFP HRSEVQCLHR 120 WQKVLNPELV KGPWTQEEDE KITKLVAKYG PTKWSVIAKS LPGRIGKQCR ERWHNHLNPD 180 IKKDAWTLDE ELTLLNAHRI NGNKWAELAK LLPGRTDNAI KNHWNSSLKK KLEFYLATGS 240 LPPVSKNVLL NGARDISRTT LVRSPVLASG DTIESCKVKD GKDKLDAILA DHDVAAYRQR 300 ESTNPEGTKC LAVTTHSNAE SEFERHRFCG EVDQYRIIGA AVHCDTPIYE TLYYEPPVIE 360 SHGQLDSNLC NTFLMQPEAD VTALSPTPSI TPPSVNSRSL YTQTPESILR IAAKSFPITP 420 SILRKRKSEL QQPKETVISN TDHDQTNSSE NTGLQNNSLC ENPTCDNEDG LSSNQSFNSS 480 PPYRLRFKRT SVLKSVEKQL DFTTVMEQDC RDNNLKDGEV KKVPPVTKFV YTRQKR

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MARSLVVSIT IRFRDLDLGL MSEVKFGDIC LENKESTVAS SSSVSENSSS AALKSPGATS  60
PRSVSPAHRR TTGPIRRAKG GWTPEEDDTL RKAVSAFRGK SWKKIAEFFP HRSEVQCLHR  120
WQKVLNPELV KGPWTQEEDE KITKLVAKYG PTKWSVIAKS LPGRIGKQCR ERWHNHLNPD  180
IKKDAWTLDE ELTLLNAHRI NGNKWAELAK LLPGRTDNAI KNHWNSSLKK KLEFYLATGS  240
LPPVSKNVLL NGARDISRTT LVRSPVLASG DTIESCKVKD GKDKLDAILA DHDVAAYRQR  300
ESTNPEGTKC LAVTTHSNAE SEFERHRFCG EVDQYRIIGA AVHCDTPIYE TLYYEPPVIE  360
SHGQLDSNLC NTFLMQPEAD VTALSPTPSI TPPSVNSRSL YTQTPESILR IAAKSFPITP  420
SILRKRKSEL QQPKETVISN TDHDQTNSSE NTGLQNNSLC ENPTCDNEDG LSSNQSFNSS  480
PPYRLRFKRT SVLKSVEKQL DFTTVMEQDC RDNNLKDGEV KKVPPVTKFV YTRQKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-135	MYB family protein