PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY71896.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 430aa    MW: 47521.5 Da    PI: 5.8189
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY71896.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS302.51e-92494272373
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++lL++cA+a++++d++laq++L+ l+++a pdgd+ qRl+  f++AL +r +r   + +k lp  +    n++ +++ l  f++++P+++f++ +aN 
  TEY71896.1  49 EQLLVHCANAIETNDATLAQQILWVLNNIAPPDGDSGQRLTCGFLRALISRATR--IGSCKLLPDVAVFIPNHKFSITELAGFVDLTPWHRFGFTAANA 145
                 79****************************************************..44445555555544457777777888***************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl...vakrledlelee 193
                 a++eaveg + vHi+D+++++++Q p+L++++++Rpegpp l++T+ g+ e +      ++e +g +L +fA++ +v +ef+v+    ++ +++l +++
  TEY71896.1 146 AVMEAVEGRSVVHIVDLSLTHCMQIPTLIDSFSTRPEGPPFLKLTVAGATEDFppmLDLSYEDLGAKLINFARSRNVAMEFRVVpssSSDGFSSL-IDH 243
                 *************************************************888898888999**********************966533344444.666 PP

        GRAS 194 Lrvkp.....gEalaVnlvlqlhrlld.esvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286
                 L++        Eal+Vn+++ lh+++d +++  +s+r+++Lk+v++l+P  v +v+++ad +se++++r+ +a +y +  +d++e+ lpres++r+++E
  TEY71896.1 244 LKITGaggsnSEALIVNCQMLLHYIPDlQTLGASSPRSAFLKAVRGLNPCTVLLVDEDADFTSENLVARLRSAYNYLWIPYDTVETFLPRESRQRQWYE 342
                 6666566666****************955667777**************************************************************** PP

        GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 +  + ++i+nvva+eg +r+er e ++kW +r++ aGF+ + +se+a++++k++l +++  g+ ++ e++ lvl+Wk++++v+++aW
  TEY71896.1 343 AD-MCWKIENVVAQEGPQRVERLEPKGKWVQRMRGAGFRGAGFSEEAVAEVKSMLDEHA-AGWGMKREEQDLVLTWKGHNVVFATAW 427
                 **.9*******************************************************.8899999999***************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    
MMQFSESFPP PPPPPPLPHQ IVPNKPARLW PGLPSPKLQA SFGDANCMEQ LLVHCANAIE  60
TNDATLAQQI LWVLNNIAPP DGDSGQRLTC GFLRALISRA TRIGSCKLLP DVAVFIPNHK  120
FSITELAGFV DLTPWHRFGF TAANAAVMEA VEGRSVVHIV DLSLTHCMQI PTLIDSFSTR  180
PEGPPFLKLT VAGATEDFPP MLDLSYEDLG AKLINFARSR NVAMEFRVVP SSSSDGFSSL  240
IDHLKITGAG GSNSEALIVN CQMLLHYIPD LQTLGASSPR SAFLKAVRGL NPCTVLLVDE  300
DADFTSENLV ARLRSAYNYL WIPYDTVETF LPRESRQRQW YEADMCWKIE NVVAQEGPQR  360
VERLEPKGKW VQRMRGAGFR GAGFSEEAVA EVKSMLDEHA AGWGMKREEQ DLVLTWKGHN  420
VVFATAWLPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-168GRAS family protein