PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY71871.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 455aa MW: 50351.1 Da PI: 7.5149

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY71871.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	39.8	1.1e-12	167	223	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++ +e+Aa+a++ a++k++g TEY71871.1 167 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqSRKGRQ-GGYDMEEKAARAYDLAALKYWG 223 78*****************87776664446655.77****************98 PP
2	AP2	46.7	7.8e-15	266	317	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g TEY71871.1 266 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDVAAIKFRG 317 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MDDNHHSSSN AVSTPAPINF SFNYPAPKLE DFFGVGHPHH YQGGMALSLD SMYYHHTNTQ 60 PTANTTGTDF LSSLQEYPLY YAPPPPTPHK EPDHPSPPDQ ISGGEAYNEL QTLSLSMSPG 120 SQSSCITAPV VVADAVTYDN KKRGQDKVDQ KQIVHRKSID TFGQRTSQYR GVTRHRWTGR 180 YEAHLWDNSC KKEGQSRKGR QGGYDMEEKA ARAYDLAALK YWGPSTHINF PLENYQQELE 240 EMKNMSRQEY VAHLRRKSSG FSRGASIYRG VTRHHQHGRW QARIGRVAGN KDLYLGTFST 300 QEEAAEAYDV AAIKFRGVNA VTNFDITRYD VERIMESNGL LPGEMARRNK EVVVVAASSS 360 NDINAEPVVV AKECEWRVAL PNGMGEAGKM SAPSSLASSR EGSPDRNNVL PIQFPALPSK 420 FFPCPTGGEG AAAWIPAAGP MRAQVPLFSA WAADV

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MDDNHHSSSN AVSTPAPINF SFNYPAPKLE DFFGVGHPHH YQGGMALSLD SMYYHHTNTQ  60
PTANTTGTDF LSSLQEYPLY YAPPPPTPHK EPDHPSPPDQ ISGGEAYNEL QTLSLSMSPG  120
SQSSCITAPV VVADAVTYDN KKRGQDKVDQ KQIVHRKSID TFGQRTSQYR GVTRHRWTGR  180
YEAHLWDNSC KKEGQSRKGR QGGYDMEEKA ARAYDLAALK YWGPSTHINF PLENYQQELE  240
EMKNMSRQEY VAHLRRKSSG FSRGASIYRG VTRHHQHGRW QARIGRVAGN KDLYLGTFST  300
QEEAAEAYDV AAIKFRGVNA VTNFDITRYD VERIMESNGL LPGEMARRNK EVVVVAASSS  360
NDINAEPVVV AKECEWRVAL PNGMGEAGKM SAPSSLASSR EGSPDRNNVL PIQFPALPSK  420
FFPCPTGGEG AAAWIPAAGP MRAQVPLFSA WAADV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-139	AP2 family protein