PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY71070.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 288aa MW: 32990.7 Da PI: 10.1291

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY71070.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	97	8e-31	44	93	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fs++g+lyey+ TEY71070.1 44 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSTRGRLYEYA 93 79***********************************************8 PP
2	K-box	51	6.4e-18	155	207	48	100
K-box 48 lkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 l+eL+++e ++ek++++iR+kKne+l+++ie +qk+e el+++n++Lr+k+ e TEY71070.1 155 LQELRNMEGKVEKAISRIRTKKNEMLFAEIELMQKRELELHNANMYLRAKIGE 207 79************************************************965 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MIPYLKKSTS LQLVLPVFVM EFLSQESESS NSVRKNGRGK IQIKRIENTT NRQVTFCKRR 60 NGLLKKAYEL SVLCDAEVAL VVFSTRGRLY EYANNSVRAT IDRYKKATVD SSNTMSTSEA 120 NTQAILPARS HQAPQTNKRN SEFKQVAIKS ALYALQELRN MEGKVEKAIS RIRTKKNEML 180 FAEIELMQKR ELELHNANMY LRAKIGESER AQQQMNMMNQ EYEQPSMSSH NYDVRNFLPV 240 NLLQPEHDRH YSCQDQTPLQ LVSLLTVTSP GFGIKNFSCH GISKTKNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58780.1	9e-85	MIKC_MADS family protein