PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY70497.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 391aa MW: 44220 Da PI: 5.5051

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY70497.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	30.6	8.6e-10	58	127	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse....ng..........krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++ n+ ++ +++g ++ +e+Aa+ ++ a++k++g TEY70497.1 58 SIYRGVTRHRWTGRYEAHLWDkTTWnsiqNKrgrqsdqfesIKCVINVGAYDNEEDAARTYDLAALKYWG 127 57*****************7777666533888777766555999********************98 PP
2	AP2	53.9	4.6e-17	170	221	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I ++ +k+ +lg++ t eeAa+a++ a+ +++g TEY70497.1 170 SKYRGVARHHHNGRWEARIGRVCG---NKYLYLGTYSTQEEAAEAYDMAAIEYRG 221 89**99*******99644...4***********************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MKRKSPSNSC SSSSSSCCIE SPSIIAQPEL KPKAKPKRVR AKRTQSDSSA TSAKSRSSIY 60 RGVTRHRWTG RYEAHLWDKT TWNSIQNKRG RQSDQFESIK CVINVGAYDN EEDAARTYDL 120 AALKYWGPST ILNFHVEGYK KDVEEMQNLT REEYLASLRR RSSGFSRGVS KYRGVARHHH 180 NGRWEARIGR VCGNKYLYLG TYSTQEEAAE AYDMAAIEYR GPNAVTNFDI SNYADKLKKF 240 LPEVQVEEVH GKQETNSTPP DVLQADEEPH RVAETGSPKP EPKDFNESEG MITMDPIEEH 300 GHPWNLCLDT LFNILPVPDM PLGEVFDYKG FDDDIECIFD EPLDEYDFLQ YGCQIEAADA 360 VEAQDMKRQD TFTSTSPSSS PLSSTTACSN I

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MKRKSPSNSC SSSSSSCCIE SPSIIAQPEL KPKAKPKRVR AKRTQSDSSA TSAKSRSSIY  60
RGVTRHRWTG RYEAHLWDKT TWNSIQNKRG RQSDQFESIK CVINVGAYDN EEDAARTYDL  120
AALKYWGPST ILNFHVEGYK KDVEEMQNLT REEYLASLRR RSSGFSRGVS KYRGVARHHH  180
NGRWEARIGR VCGNKYLYLG TYSTQEEAAE AYDMAAIEYR GPNAVTNFDI SNYADKLKKF  240
LPEVQVEEVH GKQETNSTPP DVLQADEEPH RVAETGSPKP EPKDFNESEG MITMDPIEEH  300
GHPWNLCLDT LFNILPVPDM PLGEVFDYKG FDDDIECIFD EPLDEYDFLQ YGCQIEAADA  360
VEAQDMKRQD TFTSTSPSSS PLSSTTACSN I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	3e-80	AP2 family protein