PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY69755.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 245aa MW: 28227.2 Da PI: 9.5234

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY69755.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	97	7.9e-31	18	68	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fss+g+lyeys+ TEY69755.1 18 KRIESTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSN 68 79***********************************************95 PP
2	K-box	95	1.2e-31	105	192	13	100
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +++ +qqe++kL+++i+ +q ++R+++Ge+++sL lk+L+++e + e+++++iR+kKnell+++ie +q++e el+++n+ Lr+k++e TEY69755.1 105 DHQFYQQEANKLRRQIRDMQASNRQMMGEGVTSLPLKDLKSMEGKGERAISRIRAKKNELLCAEIELMQRREIELHNANMFLRSKIAE 192 689**********************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MALCNQERKN GRGKIEIKRI ESTTNRQVTF CKRRNGLLKK AYELSVLCDA EVALVVFSSR 60 GRLYEYSNNS VRATIDRYKK ATADSTSAVS TSEANTQAIF DFSFDHQFYQ QEANKLRRQI 120 RDMQASNRQM MGEGVTSLPL KDLKSMEGKG ERAISRIRAK KNELLCAEIE LMQRREIELH 180 NANMFLRSKI AESERAQQQM SLMPAESEYN EPMTSQPYDL RSFLPMNLME PPSYTRSDQT 240 PLQLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18960.1	3e-94	MIKC_MADS family protein