PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY69021.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 575aa MW: 63209.6 Da PI: 6.7828

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY69021.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77.1	1.9e-24	121	222	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ +++ + t+ ++d +g +W++++iyr++++r++lt+GW++Fv+ ++L +gD++vF + +++el TEY69021.1 121 FAKTLTQSDANNGGGFSVPRYCAETIfprldysAEPPVQ--TILVKDVHGAVWKFRHIYRGTPRRHLLTTGWSNFVNHKKLVAGDSIVFL--RADNGEL 215 89**************************986545444..8********************************************..4489999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ TEY69021.1 216 CVGIRRA 222 ***97 PP
2	Auxin_resp	113.2	2.5e-37	282	365	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++FevvY+Pra+++eFvv+ + v++a++v+++ GmRfkmafetedss++++ +Gt+++v+ dp++Wp+S+Wr+L+ TEY69021.1 282 AASVAANGQPFEVVYYPRAGSPEFVVRESAVRAAMRVQWCSGMRFKMAFETEDSSRISWfMGTISSVQVDDPIHWPHSPWRLLQ 365 68899*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MINVMHSLSK PMNQMESCLD PQLWHACAGG MAQIPPPNSK VNYFPQGHAE HANENVDFLK 60 CPRIAPLMLC RVESIKYLAD SESDEVFAKI RLVPLLGNES GVCDDVGRVD GNEEREKTNS 120 FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSAEPPVQT ILVKDVHGAV WKFRHIYRGT 180 PRRHLLTTGW SNFVNHKKLV AGDSIVFLRA DNGELCVGIR RAKRGIGGGA EVSSGWNTGI 240 PALQGGFSGF LGESVGLCRR RGGGELVLKD RGNVKAEVVV EAASVAANGQ PFEVVYYPRA 300 GSPEFVVRES AVRAAMRVQW CSGMRFKMAF ETEDSSRISW FMGTISSVQV DDPIHWPHSP 360 WRLLQVVWDE PDLLQNVKRV NPWLVELVSN MAAGHGFSRF SPPRKRPRLP LPTEFQLPMG 420 TLVTNPFSPS SPLCCLPDHI PAGVQGARHA RSEKLQPFDF KLLDYTAQFP RLLASYPLQN 480 PNCDASLKMG SSPYEVKKSN EAKTPMFLLF GHPILTAEQI SQSHSADTEG NISDGNQENT 540 ANASNASGSA VIQNFPPEAS SDGEFPGFDD QTPDF

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MINVMHSLSK PMNQMESCLD PQLWHACAGG MAQIPPPNSK VNYFPQGHAE HANENVDFLK  60
CPRIAPLMLC RVESIKYLAD SESDEVFAKI RLVPLLGNES GVCDDVGRVD GNEEREKTNS  120
FAKTLTQSDA NNGGGFSVPR YCAETIFPRL DYSAEPPVQT ILVKDVHGAV WKFRHIYRGT  180
PRRHLLTTGW SNFVNHKKLV AGDSIVFLRA DNGELCVGIR RAKRGIGGGA EVSSGWNTGI  240
PALQGGFSGF LGESVGLCRR RGGGELVLKD RGNVKAEVVV EAASVAANGQ PFEVVYYPRA  300
GSPEFVVRES AVRAAMRVQW CSGMRFKMAF ETEDSSRISW FMGTISSVQV DDPIHWPHSP  360
WRLLQVVWDE PDLLQNVKRV NPWLVELVSN MAAGHGFSRF SPPRKRPRLP LPTEFQLPMG  420
TLVTNPFSPS SPLCCLPDHI PAGVQGARHA RSEKLQPFDF KLLDYTAQFP RLLASYPLQN  480
PNCDASLKMG SSPYEVKKSN EAKTPMFLLF GHPILTAEQI SQSHSADTEG NISDGNQENT  540
ANASNASGSA VIQNFPPEAS SDGEFPGFDD QTPDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	1e-176	ARF family protein