PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY67860.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 545aa MW: 60532.6 Da PI: 8.5097

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY67860.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.9	4.8e-18	59	102	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT +Ed++l ++v+++ ++Wk+I+++m+ gRt+ qc +rwqk+l TEY67860.1 59 WTDDEDKRLTEVVQKFNAKNWKKISECMP-GRTDVQCLHRWQKVL 102 ***************************.**********986 PP
2	Myb_DNA-binding	52.6	1e-16	108	154	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 + +WT+eEd++ ++ v ++G++ W+ Ia+ + gR +kqc++rw+++l TEY67860.1 108 KSPWTKEEDDRVIEFVVKYGTKKWSYIANFVH-GRNGKQCRERWHNHL 154 679***************************.***********97 PP
3	Myb_DNA-binding	54.7	2.4e-17	160	202	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+e l +++++lG++ W+ Ia+ ++ gRt++ +k++w+ TEY67860.1 160 KDAWTKEEEETLRHYHQLLGNK-WAEIAKFLP-GRTDNAIKNHWN 202 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence
MIRARKEIRT PESTKEVGFA SYSSFSDSSS GVVTPRSSDS GLSVRGCSHP TKRSSQAGWT 60 DDEDKRLTEV VQKFNAKNWK KISECMPGRT DVQCLHRWQK VLNPDLRKSP WTKEEDDRVI 120 EFVVKYGTKK WSYIANFVHG RNGKQCRERW HNHLDPAIKK DAWTKEEEET LRHYHQLLGN 180 KWAEIAKFLP GRTDNAIKNH WNCSVKKRPD MNSPPILAME SQGSSYLNIF NNEEEKLQAE 240 SGTISPNPDQ KVTQKSDGSC STIMAFGNTK FPADHAQAKP ALLDSCRSYE KVSTNGVHFG 300 SPPTSISSSC FNGICNRVGS YNKSTNSLND VREDALDSVP TNAKVFTSTQ MSRDSPCVTD 360 GSCDYSPVDT VLSLSVCGYI DNSKKIKKRR ICQSPLLADE GSGLSCYDPS RPNGSDIKTE 420 HASYQLVSSY PINLALSISS PESILKSSAI SYRNTPSIIR RKTYREAASG ICSSTSMHAA 480 GCSNLTSERG WLPCHDTGSD SSVIGQAVER RLEHSFDLEW DSSSVKCYTP GSSQLRSDKK 540 IVLAP

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence

MIRARKEIRT PESTKEVGFA SYSSFSDSSS GVVTPRSSDS GLSVRGCSHP TKRSSQAGWT  60
DDEDKRLTEV VQKFNAKNWK KISECMPGRT DVQCLHRWQK VLNPDLRKSP WTKEEDDRVI  120
EFVVKYGTKK WSYIANFVHG RNGKQCRERW HNHLDPAIKK DAWTKEEEET LRHYHQLLGN  180
KWAEIAKFLP GRTDNAIKNH WNCSVKKRPD MNSPPILAME SQGSSYLNIF NNEEEKLQAE  240
SGTISPNPDQ KVTQKSDGSC STIMAFGNTK FPADHAQAKP ALLDSCRSYE KVSTNGVHFG  300
SPPTSISSSC FNGICNRVGS YNKSTNSLND VREDALDSVP TNAKVFTSTQ MSRDSPCVTD  360
GSCDYSPVDT VLSLSVCGYI DNSKKIKKRR ICQSPLLADE GSGLSCYDPS RPNGSDIKTE  420
HASYQLVSSY PINLALSISS PESILKSSAI SYRNTPSIIR RKTYREAASG ICSSTSMHAA  480
GCSNLTSERG WLPCHDTGSD SSVIGQAVER RLEHSFDLEW DSSSVKCYTP GSSQLRSDKK  540
IVLAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-71	MYB family protein