PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY67857.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | NF-YC | ||||||||
Protein Properties | Length: 109aa MW: 11985 Da PI: 9.744 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 105.2 | 4.3e-33 | 19 | 98 | 19 | 97 |
NF-YC 19 helPlarikkilk.adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivp 97 h+lPlarikki+k + edvkmis eaP+++skacelfi elt r+w + + k rt++k d+aaav +tdifdflv v TEY67857.1 19 HSLPLARIKKIMKkSGEDVKMISGEAPIVFSKACELFIEELTKRAWAMTLQRKTRTMHKEDVAAAVMETDIFDFLVGLVS 98 99**********73579**********************************************************98876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 109 aa Download sequence |
MRQPGAYSNL LSGGKTGPHS LPLARIKKIM KKSGEDVKMI SGEAPIVFSK ACELFIEELT 60 KRAWAMTLQR KTRTMHKEDV AAAVMETDIF DFLVGLVSHT PNPSAPLES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54830.3 | 3e-33 | NF-YC family protein |