PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY67674.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 387aa MW: 42167.2 Da PI: 9.7014

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY67674.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.4	0.00011	166	187	3	23
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 Cp+Cg +F r++ L+ H + H TEY67674.1 166 CPKCGDHFVRWEALEAHHFSkH 187 *****************87766 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MLHDSNKGIR KEGRKEKMPA VWFALRRTMK CRSEQTDVHD PDAAASSNLS NISTKRSSGR 60 GARSGCSRSI SNLKDVINGS NRHTEKPAIC SPRSIGSSEL LNPITHQVML DSATCELKIS 120 GGYGASDFVG VLKPLGQGTS PGRRSPSTRG AASSTRTRSS FGGLFCPKCG DHFVRWEALE 180 AHHFSKHAVS EVGEGESSRR IVEIICRARP DTAETGIERI LKVHNMQKTL AQFEDYREVV 240 KIRASKLAKK HPRCLADGNE LLRFHGATLE CPIGLKGSSS LCASEKCRVC RILRDGFVGR 300 KEGVFTASTS SRAIEMVEGD SSLRKALIVC RVIAGRVHRP LENIEEMVAQ SGFDSVAGKV 360 GAHSNIEELY LLSATALLPC FVVIYKC

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MLHDSNKGIR KEGRKEKMPA VWFALRRTMK CRSEQTDVHD PDAAASSNLS NISTKRSSGR  60
GARSGCSRSI SNLKDVINGS NRHTEKPAIC SPRSIGSSEL LNPITHQVML DSATCELKIS  120
GGYGASDFVG VLKPLGQGTS PGRRSPSTRG AASSTRTRSS FGGLFCPKCG DHFVRWEALE  180
AHHFSKHAVS EVGEGESSRR IVEIICRARP DTAETGIERI LKVHNMQKTL AQFEDYREVV  240
KIRASKLAKK HPRCLADGNE LLRFHGATLE CPIGLKGSSS LCASEKCRVC RILRDGFVGR  300
KEGVFTASTS SRAIEMVEGD SSLRKALIVC RVIAGRVHRP LENIEEMVAQ SGFDSVAGKV  360
GAHSNIEELY LLSATALLPC FVVIYKC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27240.1	1e-131	C2H2 family protein