PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY66515.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 242aa MW: 27345.4 Da PI: 9.8246 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 69.2 | 3.7e-22 | 11 | 59 | 3 | 51 |
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ien + rq t++kR++gi+KKA EL vLCd++va+i+f+++g+l ++s TEY66515.1 11 IENPTSRQLTYTKRKEGIIKKAGELAVLCDTDVALIMFAPSGRLASFAS 59 9*******************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MGRKKLSMRL IENPTSRQLT YTKRKEGIIK KAGELAVLCD TDVALIMFAP SGRLASFASN 60 RRFSSLFIYL LFNFFYVNCK KKNAKNGVRI EDILLRFVDR PDELRGGPIN HEEELEGKLD 120 KLTRKQRESK EKMRYYEPNV KKINSALEAG VYQQFLTTAI QRIQTSKAKL LGNQLGHERT 180 ENVEVQAATM RMDDAVSLTG HSAEGNHAWM RLNMDENQSG SSSAAGCGIS HGIYEALRFG 240 CC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22130.1 | 2e-24 | MIKC_MADS family protein |