PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY66235.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 315aa MW: 35462.2 Da PI: 6.9014

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY66235.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	22.8	2.4e-07	127	147	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H TEY66235.1 127 CEICGKGFKRDANLRMHMRAH 147 *******************99 PP
2	zf-C2H2	11.7	0.00083	212	235	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y C C+ ksFs +L++H++ + TEY66235.1 212 YACDRCNrKSFSVVADLRSHMKHC 235 89*******************987 PP
3	zf-C2H2	12.1	0.00062	244	259	6	21
TTEEESSHHHHHHHHH CS zf-C2H2 6 CgksFsrksnLkrHir 21 Cg+sFsrk+ L H+ TEY66235.1 244 CGTSFSRKDKLFGHMA 259 **************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MSSLGEIHHT PAASDPRLPL MNLSVVQSRM DNLHQFLSES VTTNTPIGRP QMEMVSSEIT 60 SAIHQIIVNG AALLSCAAAP SVSSNQLAEE KTGKMLNQVE LEQNPDDDYE IIEIDAVELL 120 AEHVHLCEIC GKGFKRDANL RMHMRAHGNQ FKTPEALAKP GGGGDDFSRR KARFSCPYAG 180 CNRNRRHGKF RALKSVVCVR NHFRRSHCPK MYACDRCNRK SFSVVADLRS HMKHCGETKW 240 RCSCGTSFSR KDKLFGHMAL FEGHMPAVEE EEEEGKGRMK AESDDVLLEL DEFGRIEDYF 300 FDDVMNSSNL GYFNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	7e-76	C2H2 family protein