PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY66130.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | LBD | ||||||||
Protein Properties | Length: 176aa MW: 19071.5 Da PI: 7.3011 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 140.4 | 5.8e-44 | 10 | 108 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC ++Cv++pyfp e+p+kfanvhk+FGasnv kll++l +++r+da++sl+yeAear+rdPvyG++g i+ lq+q+++l++el+++++ TEY66130.1 10 PCAACKFLRRKCIPGCVFSPYFPPEEPQKFANVHKIFGASNVAKLLNELLPHQRDDAVNSLAYEAEARVRDPVYGCIGAITFLQRQVDRLQKELDAANA 108 7*********************************************************************************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MASSSSYNPP CAACKFLRRK CIPGCVFSPY FPPEEPQKFA NVHKIFGASN VAKLLNELLP 60 HQRDDAVNSL AYEAEARVRD PVYGCIGAIT FLQRQVDRLQ KELDAANADL IRFACNDVPL 120 QAAQPRPPQE AAGVRNVGFG GGGGGRLYQT GGVQISYDVP WNDIYNSHGG GMDGNN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63090.2 | 5e-71 | LBD family protein |