PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY65036.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GRAS

Protein Properties

Length: 447aa MW: 49245.4 Da PI: 5.1746

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY65036.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	288.6	1.7e-88	149	442	1	285
GRAS 1 lvelLlecAeavssgdle..........laqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89 l++lL++cAe+vs+ d +a++l+ ++e++s +gdp+qRl ay++eAL+arl++s+s ++k+l++ e s + ++ ++l +++P TEY65036.1 149 LKHLLIACAEVVSEADIVpfserkiaasAAETLMDIIQERVSVSGDPLQRLGAYILEALRARLLSSGSLICKKLNCDEPS---GPDLMSHMQLIAQICP 244 689********977533334445555899999999**************************************9...9999999***** PP GRAS 90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186 ++kf++++a I ea+e+e+r+HiiDf+i qG QW++++qa + Rp+gpp +RiTgv+++es + le +g+rLa++A ++gvpfef+ + ++ TEY65036.1 245 FYKFAYMAAGDVIGEAMENEKRIHIIDFQIAQGSQWLSFIQAVSRRPDGPPYVRITGVDDSESAhaRGGGLELVGQRLAQLALSCGVPFEFHG-AGTSG 342 ********************************************************9888889999*******************.899 PP GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpreseerik 284 +d++le+L+v++gEalaVn+ + lh+++desv+++++rd++L+lvkslsPkv+++veqe+++n+++F +rf e+leyy+a+f+++ +a+l+r++ +r+ TEY65036.1 343 SDVKLENLNVQHGEALAVNFPYVLHHIPDESVNTSNHRDRLLRLVKSLSPKVMTLVEQESNTNTATFSKRFRETLEYYAAMFECIdAAGLARDEMQRSI 441 *************************************************************************************88999999988877 PP GRAS 285 v 285 v TEY65036.1 442 V 442 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MQKASKEALA CSGVNSHLVP SKSQDTELSF QAFAEPFYTL ESTPMTGYAV FSSPTAVSVS 60 SNKSPFSPQL SHSYASDVHH SSENSSSLNG SFEANDESNL AHSLWLLSNE LHGPECGSEY 120 NGSLTDESVQ PYYSPRYHRI VEMAPDMDLK HLLIACAEVV SEADIVPFSE RKIAASAAET 180 LMDIIQERVS VSGDPLQRLG AYILEALRAR LLSSGSLICK KLNCDEPSGP DLMSHMQLIA 240 QICPFYKFAY MAAGDVIGEA MENEKRIHII DFQIAQGSQW LSFIQAVSRR PDGPPYVRIT 300 GVDDSESAHA RGGGLELVGQ RLAQLALSCG VPFEFHGAGT SGSDVKLENL NVQHGEALAV 360 NFPYVLHHIP DESVNTSNHR DRLLRLVKSL SPKVMTLVEQ ESNTNTATFS KRFRETLEYY 420 AAMFECIDAA GLARDEMQRS IVWRRMW

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MQKASKEALA CSGVNSHLVP SKSQDTELSF QAFAEPFYTL ESTPMTGYAV FSSPTAVSVS  60
SNKSPFSPQL SHSYASDVHH SSENSSSLNG SFEANDESNL AHSLWLLSNE LHGPECGSEY  120
NGSLTDESVQ PYYSPRYHRI VEMAPDMDLK HLLIACAEVV SEADIVPFSE RKIAASAAET  180
LMDIIQERVS VSGDPLQRLG AYILEALRAR LLSSGSLICK KLNCDEPSGP DLMSHMQLIA  240
QICPFYKFAY MAAGDVIGEA MENEKRIHII DFQIAQGSQW LSFIQAVSRR PDGPPYVRIT  300
GVDDSESAHA RGGGLELVGQ RLAQLALSCG VPFEFHGAGT SGSDVKLENL NVQHGEALAV  360
NFPYVLHHIP DESVNTSNHR DRLLRLVKSL SPKVMTLVEQ ESNTNTATFS KRFRETLEYY  420
AAMFECIDAA GLARDEMQRS IVWRRMW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17230.1	1e-115	GRAS family protein