PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY64903.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 362aa MW: 40448.9 Da PI: 9.4206

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY64903.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.9	4e-06	51	73	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H TEY64903.1 51 YVCEICNQGFQRDQNLQMHRRRH 73 9*********************9 PP
2	zf-C2H2	17.1	1.6e-05	128	150	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k + +s++k H++t+ TEY64903.1 128 WVCHKCSKGYAVQSDYKAHLKTC 150 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MLTDIDLSAL PEPSFSSCDT TKRKRRPAGT PDPDAEVVSL SPKTLLESDR YVCEICNQGF 60 QRDQNLQMHR RRHKVPWKLL KRETPVARKR VFVCPEPSCL HHNPCHALGD LVGIKKHFRR 120 KHSNHKQWVC HKCSKGYAVQ SDYKAHLKTC GTRGHSCDCG RVFSRVESFI EHQDACSMGP 180 RTASSPSPSS DTNLSALPSM REACGGSRPS NLQLQLLTTK IDEDHSTQLQ LSIGSSEITG 240 GVISPRGSST AGELKEQLRI AMAEKTYAEE ARQMARRQME AAEHEFANAK RIRQTAQAEL 300 QKAQALRDHA TKKINASTLE ITCHSCKSKF QQALFAESSS SRVGLNFIST ALRDWEVKKA 360 NQ

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MLTDIDLSAL PEPSFSSCDT TKRKRRPAGT PDPDAEVVSL SPKTLLESDR YVCEICNQGF  60
QRDQNLQMHR RRHKVPWKLL KRETPVARKR VFVCPEPSCL HHNPCHALGD LVGIKKHFRR  120
KHSNHKQWVC HKCSKGYAVQ SDYKAHLKTC GTRGHSCDCG RVFSRVESFI EHQDACSMGP  180
RTASSPSPSS DTNLSALPSM REACGGSRPS NLQLQLLTTK IDEDHSTQLQ LSIGSSEITG  240
GVISPRGSST AGELKEQLRI AMAEKTYAEE ARQMARRQME AAEHEFANAK RIRQTAQAEL  300
QKAQALRDHA TKKINASTLE ITCHSCKSKF QQALFAESSS SRVGLNFIST ALRDWEVKKA  360
NQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	22	27	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68130.1	1e-125	C2H2 family protein