PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY64250.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 625aa    MW: 70568.3 Da    PI: 6.7451
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY64250.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS363.43.3e-1112466171374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cAeavs+ ++++aq+lL++ ++++sp+gdp++Rla++f++AL ar+++++  ly + ++++ +    ++ l++++ ++ ++P+ ++s++ aN
  TEY64250.1 246 LRTLLTRCAEAVSTYNTAAAQNLLNQTRQHSSPYGDPNERLAHCFANALDARMTGNGAALYTSSAAKSIP---AAQLLKSYQSYVTACPFKRMSNIFAN 341
                 5789***************************************************999999877777777...99************************ PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 + I +   +++++HiiDf+i +G+QWp++++ L+ +p+gpp+l+iTg++ p++g    e++e+tg+rL + +++++vpfe+++ +akr+++++leeL++
  TEY64250.1 342 KSIAKISREATKLHIIDFGILYGFQWPCIIHGLSLKPGGPPRLKITGIDYPQPGfrPGERVEQTGRRLVECCKRFNVPFEYKA-IAKRWDEVDLEELEI 439
                 *****************************************************9*9***************************.7************** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +++E+++Vn+ ++l ++ des  + s+rd+vL+l+k+++P ++v+   + +++++ F +rf eal +ys++fd++ea+lpre+ +r ++Ere+ gr+++
  TEY64250.1 440 HSEEMVVVNCLYRLRHTSDESSGVGSQRDAVLSLIKRINPVLFVHGVANGSYSASFFTTRFKEALFHYSSVFDMMEATLPREDPDRLMYEREVYGRDVM 538
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 nv+acegaer+er  t+++W++r ++aGF+ v+l+ ++++++++ +r  +   + +ee+ g+l++gWk+r ++++S+W+
  TEY64250.1 539 NVIACEGAERVERPDTYKQWQMRNQRAGFGVVALNREIVEEVRAKVRWGYHTDFLLEEDGGWLLQGWKGRVMYALSCWT 617
                 ***********************************************999777*************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 625 aa     Download sequence    
MGTISRCDSR NEFQLTYSEE CSGQAAARHS SGEGSVPGDY FGNVFDYIKR MLMEEDDLDH  60
RPCMFQDCSA LQAAEKYFHD ALSDRASAPP LDFTGSANFP PSDPSTISCD LDWLAESRAV  120
VVDSNPPHHD STNFHQFLQN SPDHAAAGVR KTRGRGGENE DQKRCSKQSA AGYAEESVQL  180
DKYDKSLLCP KLNPHFYDDS PPCLDDETSD DSEEESKKQY RKTKEVKRGR PKGSKKNRKV  240
SQVMDLRTLL TRCAEAVSTY NTAAAQNLLN QTRQHSSPYG DPNERLAHCF ANALDARMTG  300
NGAALYTSSA AKSIPAAQLL KSYQSYVTAC PFKRMSNIFA NKSIAKISRE ATKLHIIDFG  360
ILYGFQWPCI IHGLSLKPGG PPRLKITGID YPQPGFRPGE RVEQTGRRLV ECCKRFNVPF  420
EYKAIAKRWD EVDLEELEIH SEEMVVVNCL YRLRHTSDES SGVGSQRDAV LSLIKRINPV  480
LFVHGVANGS YSASFFTTRF KEALFHYSSV FDMMEATLPR EDPDRLMYER EVYGRDVMNV  540
IACEGAERVE RPDTYKQWQM RNQRAGFGVV ALNREIVEEV RAKVRWGYHT DFLLEEDGGW  600
LLQGWKGRVM YALSCWTPFP NPISM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-157GRAS family protein