PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY64193.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 358aa MW: 39330.9 Da PI: 9.1293

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY64193.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.9	3.9e-16	59	114	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpse..ngkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+ +s + + k+++lg f+ta Aa+a+++a+ k++g TEY64193.1 59 SQYRGVTFYRRTGRWESHIWSFSFfmD-CGKQVYLGGFDTALAAARAYDRAAIKFRG 114 78*****************866555.36**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MFDLNLNNCD GRSVESSSSN DDTCSRRASS ALVTRDLFPL SAVQAQARKG RRGPRSRSSQ 60 YRGVTFYRRT GRWESHIWSF SFFMDCGKQV YLGGFDTALA AARAYDRAAI KFRGVEADIN 120 FNLTDYADMN QVMNLPKEEF VQMLRRQSSG VARGGSKIRG VAFQKGGRWE ARTGEFLGKK 180 YEKAAIVCNG SDTVTSFEST KNNSEAVSEL HNGGSQHDLN LNLGMSVSSP KKSGCLDSLK 240 LHHDAQTTRT LMLHGGNSAA SDIMSNLPLE GVPVTSQHPT LCSGVDPRFV PNNEEREKSA 300 QLELGNLAWR MNRHDQTAAA ASSGFSSPAP LGPASPVPYD YANTFAYYSW LKPYLPPP

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MFDLNLNNCD GRSVESSSSN DDTCSRRASS ALVTRDLFPL SAVQAQARKG RRGPRSRSSQ  60
YRGVTFYRRT GRWESHIWSF SFFMDCGKQV YLGGFDTALA AARAYDRAAI KFRGVEADIN  120
FNLTDYADMN QVMNLPKEEF VQMLRRQSSG VARGGSKIRG VAFQKGGRWE ARTGEFLGKK  180
YEKAAIVCNG SDTVTSFEST KNNSEAVSEL HNGGSQHDLN LNLGMSVSSP KKSGCLDSLK  240
LHHDAQTTRT LMLHGGNSAA SDIMSNLPLE GVPVTSQHPT LCSGVDPRFV PNNEEREKSA  300
QLELGNLAWR MNRHDQTAAA ASSGFSSPAP LGPASPVPYD YANTFAYYSW LKPYLPPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.2	2e-58	AP2 family protein