PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY64168.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 482aa MW: 52831.4 Da PI: 9.6737

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY64168.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.1	0.00013	88	108	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k F r nL+ H r H TEY64168.1 88 CEICNKGFQRDQNLQLHRRGH 108 *******************88 PP
2	zf-C2H2	11.3	0.0011	162	184	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + TEY64168.1 162 WKCDKCSKKYAVQSDWKAHSKIC 184 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MMSEDGLMRG YIGQDPSPNI NSNPNPNSSS KRKRNLPGTP GKLDLKLNLD FSSSLKSKLM 60 KSGLSADPDA EVIALSPKSL MATNRFLCEI CNKGFQRDQN LQLHRRGHNL PWKLKQRTNK 120 EVKKKVYICP EKTCVHHEAS RALGDLTGIK KHYSRKHGEK KWKCDKCSKK YAVQSDWKAH 180 SKICGTREYK CDCGTLFSRK DSFITHRAFC DALAEESARF SSPVASANLS FRNELLSSSG 240 NPQFSGGMFR AELGGVEGGN QLSFDHNNMQ KPRLPLWLDS ATPNNFVAAT SLPELVQMAS 300 QNHQWQVQAD HNQVGFGGAS INSMASSSSA IPIPKVLKEE EQNKGNLSQA INSLYYNHNH 360 NETNNAAAAA AHMSMSATAL LQKAAQMGST RATDSSFSPA GFGLITNASF SAGNFNSSVA 420 QNPTNLGKPE NNLNGMMAAE SSLTRDFLGV GGNDQIQNRQ FMPENELAKF AAGMEMSHYS 480 RN

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MMSEDGLMRG YIGQDPSPNI NSNPNPNSSS KRKRNLPGTP GKLDLKLNLD FSSSLKSKLM  60
KSGLSADPDA EVIALSPKSL MATNRFLCEI CNKGFQRDQN LQLHRRGHNL PWKLKQRTNK  120
EVKKKVYICP EKTCVHHEAS RALGDLTGIK KHYSRKHGEK KWKCDKCSKK YAVQSDWKAH  180
SKICGTREYK CDCGTLFSRK DSFITHRAFC DALAEESARF SSPVASANLS FRNELLSSSG  240
NPQFSGGMFR AELGGVEGGN QLSFDHNNMQ KPRLPLWLDS ATPNNFVAAT SLPELVQMAS  300
QNHQWQVQAD HNQVGFGGAS INSMASSSSA IPIPKVLKEE EQNKGNLSQA INSLYYNHNH  360
NETNNAAAAA AHMSMSATAL LQKAAQMGST RATDSSFSPA GFGLITNASF SAGNFNSSVA  420
QNPTNLGKPE NNLNGMMAAE SSLTRDFLGV GGNDQIQNRQ FMPENELAKF AAGMEMSHYS  480
RN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	31	58	KRKRNLPGTPGKLDLKLNLDFSSSLKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	2e-96	C2H2 family protein