PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY63994.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 501aa MW: 54710.4 Da PI: 5.0765

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY63994.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.8	9.3e-17	36	83	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lv++v++ G g+W+++ ++ g+ R++k+c++rw ++l TEY63994.1 36 KGPWTSAEDAILVEYVTKNGEGNWNAVQKHSGLARCGKSCRLRWANHL 83 79******************************************9986 PP
2	Myb_DNA-binding	23.7	1.1e-07	89	116	1	29
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar 29 +g++T+eE+ +++++++q+G++ W++ a+ TEY63994.1 89 KGAFTAEEEHRIIELHAQMGNK-WARMAA 116 799*****************.9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MSTESDERTK PNSGVDSPSV DDVTEGNVGG NGPLKKGPWT SAEDAILVEY VTKNGEGNWN 60 AVQKHSGLAR CGKSCRLRWA NHLRPDLKKG AFTAEEEHRI IELHAQMGNK WARMAAEPLN 120 DNLQSDDMSN LSSGNVHHPE LMPNNNFDIP AVEFKNLELN RHIFMLNFPP GNLPDIPASS 180 LLTQSLSNPY HNKSLLPTVH PSKRLCGSEP MFPGLNAPIC NAFPGGNQYH FDSSMQIGKS 240 PVFSAYDHNP ATDNARTSSL PNGSHAVLNG NSSSEPSWAT KPELPSLQTQ MGTWGSPSPS 300 PSSPLRYLES DENLIQSPPN EPMNSCNLSP QNSGLLEAVL SESETIRNSK SNSVNTPHAP 360 TFMDDSLHTL HETEWGAYDN QLSPLGHSSP SMFSGNSLDE TFHTGTFPVK EEAINGALLP 420 YDDSIEARNQ MIFSRPDFLL ASNCFSPVKH QTNEHTVKDA IEAFYGDDLS KDCKIVDAVA 480 TPSTPSHHDH DSSAWNVMPT I

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MSTESDERTK PNSGVDSPSV DDVTEGNVGG NGPLKKGPWT SAEDAILVEY VTKNGEGNWN  60
AVQKHSGLAR CGKSCRLRWA NHLRPDLKKG AFTAEEEHRI IELHAQMGNK WARMAAEPLN  120
DNLQSDDMSN LSSGNVHHPE LMPNNNFDIP AVEFKNLELN RHIFMLNFPP GNLPDIPASS  180
LLTQSLSNPY HNKSLLPTVH PSKRLCGSEP MFPGLNAPIC NAFPGGNQYH FDSSMQIGKS  240
PVFSAYDHNP ATDNARTSSL PNGSHAVLNG NSSSEPSWAT KPELPSLQTQ MGTWGSPSPS  300
PSSPLRYLES DENLIQSPPN EPMNSCNLSP QNSGLLEAVL SESETIRNSK SNSVNTPHAP  360
TFMDDSLHTL HETEWGAYDN QLSPLGHSSP SMFSGNSLDE TFHTGTFPVK EEAINGALLP  420
YDDSIEARNQ MIFSRPDFLL ASNCFSPVKH QTNEHTVKDA IEAFYGDDLS KDCKIVDAVA  480
TPSTPSHHDH DSSAWNVMPT I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.3	7e-56	MYB family protein