PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY63482.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 230aa MW: 25989.5 Da PI: 6.9676 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 90.1 | 1.2e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKAeELSvLCda+va+iifsstgkl+ey+s TEY63482.1 9 KKIDNVTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEYAS 59 68***********************************************86 PP | |||||||
2 | K-box | 48.8 | 2.9e-17 | 92 | 171 | 19 | 98 |
K-box 19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++a+L+ke+ +++R++ GedL+ L+++eLqqLe++Le +l+++ +kK e ++++i++lq+k +l eenk+L+ ++ TEY63482.1 92 SNHARLNKEVADRTNQLRRMRGEDLHGLTIQELQQLEKALELGLSRVIDKKGEKIMNEISQLQEKGMQLLEENKRLQLQV 171 57899***********************************************************************9876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 230 aa Download sequence |
MAREKIQIKK IDNVTARQVT FSKRRRGLFK KAEELSVLCD ADVALIIFSS TGKLFEYASS 60 SMKEILGRHN LHAKNLNKLE QPSLELQLVE DSNHARLNKE VADRTNQLRR MRGEDLHGLT 120 IQELQQLEKA LELGLSRVID KKGEKIMNEI SQLQEKGMQL LEENKRLQLQ VIDLTNNGAR 180 RVAITAESDT IMYEEGQSSE SFTNAGNSFG PPQDYDSSDT SLKLGLPYNG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G22540.1 | 1e-106 | MIKC_MADS family protein |