PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY63141.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 441aa MW: 48470.3 Da PI: 8.7035

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY63141.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.3	5.9e-05	81	101	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k F r nL+ H r H TEY63141.1 81 CEICNKGFQREQNLQLHRRGH 101 *******************88 PP
2	zf-C2H2	12.7	0.00038	155	177	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H + + TEY63141.1 155 WKCEKCSKRYAVQSDWKAHSKIC 177 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MLQGNDSLSN LTSAISNEAS INSSSNGNEM VGGTIPQQHM YNPSQPPPNK RRRNLPGNPD 60 PDAEVVALSP HALMATNRFL CEICNKGFQR EQNLQLHRRG HNLPWKLKQS SKDVVRKKVY 120 VCPEPSCVHH DAARALGDLT GIKKHFFRKH GEKKWKCEKC SKRYAVQSDW KAHSKICGTR 180 EYRCDCGTLF SRRDSFITHR AFCDALAEES SRTIPQTGPN HPHPQIHPFQ NPNFPQLKQE 240 TLNFTLPPWL SVPENPFPET PSLAFSAAAP SLMSATALLQ KAAQMGVAMR GKMPYLGSDH 300 EDQTILAARP HHQMGGGQGF TAASSAALAP RDEFAAAYEN MAMAATTTSG FQGFDDNFNG 360 MFNGKRNLES FQQDGGFLGS RREGGGAIVA GGGRGGEDGM TRDFLGLRAF PHRDFSNMAG 420 LDQMGSSTTS FDHQNQGPWQ S

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MLQGNDSLSN LTSAISNEAS INSSSNGNEM VGGTIPQQHM YNPSQPPPNK RRRNLPGNPD  60
PDAEVVALSP HALMATNRFL CEICNKGFQR EQNLQLHRRG HNLPWKLKQS SKDVVRKKVY  120
VCPEPSCVHH DAARALGDLT GIKKHFFRKH GEKKWKCEKC SKRYAVQSDW KAHSKICGTR  180
EYRCDCGTLF SRRDSFITHR AFCDALAEES SRTIPQTGPN HPHPQIHPFQ NPNFPQLKQE  240
TLNFTLPPWL SVPENPFPET PSLAFSAAAP SLMSATALLQ KAAQMGVAMR GKMPYLGSDH  300
EDQTILAARP HHQMGGGQGF TAASSAALAP RDEFAAAYEN MAMAATTTSG FQGFDDNFNG  360
MFNGKRNLES FQQDGGFLGS RREGGGAIVA GGGRGGEDGM TRDFLGLRAF PHRDFSNMAG  420
LDQMGSSTTS FDHQNQGPWQ S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14580.1	1e-107	C2H2 family protein