PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY63027.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 213aa MW: 25100.8 Da PI: 7.2743 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.6 | 9.2e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+snrqvt+skRrngi+KKA+E+SvLCda v+viif+++gk+++++s TEY63027.1 9 KRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFANSGKMHDFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 76.8 | 5.8e-26 | 71 | 167 | 1 | 97 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 y+k sgk+l++ak+e+l++e++++kke++ +q ++Rhl+Ged+++L+++eL+ Le++Le+++++ ++k++e+++++ ++ ++e+e+q+ +Lr++ TEY63027.1 71 YHKLSGKRLWDAKHEHLDNEINRIKKENDGMQIQLRHLKGEDISNLNYRELMVLEEALENGITTLKAKQMEFVRMMRKHNEMMEEENQNLLFKLRQM 167 7899****************************************************************************************99986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 213 aa Download sequence |
MGRGKIEIKR IENSSNRQVT YSKRRNGIMK KAKEISVLCD AHVSVIIFAN SGKMHDFCSP 60 STTLVDMLDQ YHKLSGKRLW DAKHEHLDNE INRIKKENDG MQIQLRHLKG EDISNLNYRE 120 LMVLEEALEN GITTLKAKQM EFVRMMRKHN EMMEEENQNL LFKLRQMHLD PMDDNVMEAQ 180 GVYDQQVADY EAQQQMPFAF RVQPMQPNLQ ERF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G20240.1 | 3e-78 | MIKC_MADS family protein |