PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY62079.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | WRKY | ||||||||
Protein Properties | Length: 340aa MW: 36861.6 Da PI: 5.789 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.5 | 1.7e-30 | 149 | 207 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YYrC+++ gC ++k+vers +dp+++++ Y+geH+h+ TEY62079.1 149 ADSWAWRKYGQKPIKGSPYPRNYYRCSTSkGCAARKQVERSPNDPEIFVVSYSGEHTHP 207 69************************9988****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 340 aa Download sequence |
MDDDWDLHAV VRGCAASSTT ATVSTTAAAD DPFPPFHDNG QNPFDFSVDV RNDPFQGLRE 60 IYQEFCGEDQ PPTSASVMPS PPPPRQDFMQ FKPPPPLRLN MPIHENVRFH IGSSHQNYPA 120 AIPPPVRPRR RKNQQMKMVR QMTQEELSAD SWAWRKYGQK PIKGSPYPRN YYRCSTSKGC 180 AARKQVERSP NDPEIFVVSY SGEHTHPRPT HRSSLAGSTR AKLSSPRPKP GGGNGTLLSQ 240 KGPMSASSSS SPATPSVEGE GVAQSEDVKI GEGEDDDENI IMIPSDMMND DDDMFSGFQD 300 SDGHSSGGAG DLFSPGLMSS PPWTPTGSAA TFNAGGGGSH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 128 | 132 | PRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01250.1 | 9e-48 | WRKY family protein |