PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY61765.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 433aa MW: 47569.3 Da PI: 8.6237

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY61765.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.4	5.8e-06	79	101	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H TEY61765.1 79 FVCEICNKGFQREQNLQLHRRGH 101 89*******************88 PP
2	zf-C2H2	12.7	0.00038	156	178	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H + + TEY61765.1 156 WKCEKCSKRYAVQSDWKAHSKIC 178 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MLQGNDCMSN LTSAISNEAS INSSSNGNEM VGGTIPQQHM YNPSQPPPNK RRRNLPGNPD 60 PDAEVVALSP HALMATNRFV CEICNKGFQR EQNLQLHRRG HNLPWKLKQR SNKDVVRKKV 120 YVCPEPSCVH HDAARALGDL TGIKKHFFRK HGEKKWKCEK CSKRYAVQSD WKAHSKICGT 180 REYRCDCGTL FSWRDSFITH RAFCDALAEG SSRAIPQTGP NHPHPEIHPF ENPNFPQLKQ 240 ETLNFTLPPW LSVPETPSLS FSAAAPSLMS ATALLQKAAQ MGVAMRGKMP YLGSDHEDQA 300 ILAARPHHQM GGGQGFSATS SAAMSPRDEF AAAYENMAMA AASTSGFQGF EDSFNGMFNG 360 KRNSESFQQD GGFVGLRKEG GGGGGRGGED GMTRDFLGLR AFPHRDFSNM AGLDQVGSST 420 TSFDHQNQGP WQS

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MLQGNDCMSN LTSAISNEAS INSSSNGNEM VGGTIPQQHM YNPSQPPPNK RRRNLPGNPD  60
PDAEVVALSP HALMATNRFV CEICNKGFQR EQNLQLHRRG HNLPWKLKQR SNKDVVRKKV  120
YVCPEPSCVH HDAARALGDL TGIKKHFFRK HGEKKWKCEK CSKRYAVQSD WKAHSKICGT  180
REYRCDCGTL FSWRDSFITH RAFCDALAEG SSRAIPQTGP NHPHPEIHPF ENPNFPQLKQ  240
ETLNFTLPPW LSVPETPSLS FSAAAPSLMS ATALLQKAAQ MGVAMRGKMP YLGSDHEDQA  300
ILAARPHHQM GGGQGFSATS SAAMSPRDEF AAAYENMAMA AASTSGFQGF EDSFNGMFNG  360
KRNSESFQQD GGFVGLRKEG GGGGGRGGED GMTRDFLGLR AFPHRDFSNM AGLDQVGSST  420
TSFDHQNQGP WQS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	106	119	KLKQRSNKDVVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55110.1	1e-108	C2H2 family protein